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Commits on Nov 11, 2021

• Logic bug when matching sequence names by length -- fixes igvteam#1053

  jrobinso

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Commits on Nov 10, 2021

• Fixed a typo in signing for Windows

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  davideby

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Commits on Nov 8, 2021

• update weblink examples

  jrobinso

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Commits on Nov 5, 2021

• bedpe parser -- handle inconsistent header directive (e.g. wrong color column).

  jrobinso

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• http command listener bug

  jrobinso

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• Support OPTIONS request for completeness

  jrobinso

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• close connection after "HEAD" request to 60151

  jrobinso

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• Handle http "HEAD" request to port (60151). Excel, possibly other clients, inexplicably send "HEAD" requests to IGV according to at least 1 user report.

  jrobinso

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Commits on Nov 3, 2021

• Bind "f" and "b" keystrokes to next feature and previous feature, in addition to "ctrl-f" and "ctrl-b". Also "shift-f" and "shift-b" to next/prev exon, in addition to "ctrl-shift-f/b". Fixes igvtea…

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Commits on Nov 2, 2021

• Revert "Add support for "d4" server (experimental)" -- inadvertent merge

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  jrobinso

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Commits on Nov 1, 2021

• Add support for "d4" server (experimental)

  jrobinso

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• Recognize gwas extension. Fixes igvteam#1048

  jrobinso

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Commits on Oct 19, 2021

• Updated launcher scripts to 8 GB default

  davideby

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Commits on Oct 14, 2021

• Added the JIDE jar back to the repository

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  davideby

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Commits on Oct 7, 2021

• Taking scrolling into account when exporting images. Fixes igvteam#1033

  jrobinso

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Commits on Oct 5, 2021

• Fix unit test. Remove unused code

  jrobinso

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• Fix problem with multi-locus search using webservice. Fixes igvteam#1037

  jrobinso

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• Synchronize query for tribble features -- tribble is not thread safe

  jrobinso

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Commits on Oct 2, 2021

• Fixes igvteam#1038

  jrobinso

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Commits on Oct 1, 2021

• Reload annotation tracks from "New Session" command. Fixes igvteam#1038

  jrobinso

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Commits on Sep 24, 2021

• fix logic bug with "setColor" command -- see issue igvteam#993

  jrobinso

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Commits on Sep 16, 2021

• Fixed platform-specific issue with snappy tests

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  davideby

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Commits on Sep 15, 2021

• Protect for null pointer when using pre-computed coverage scores. Possible fix for issue igvteam#1028

  jrobinso

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• remove "useByteRange" test, it is expensive and not needed 99.9% of the time. Lazy checking, which is already done, catches the 0.1%.

  jrobinso

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Commits on Sep 11, 2021

• Restore DataRange from sessions for merged tracks - fixes igvteam#1026

  jrobinso

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Commits on Sep 10, 2021

• Bug fix -- preference overrides from batch script were being stored persistently

  jrobinso

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• add "setColor" and "setAltColor" batch commands. Fixes igvteam#993

  jrobinso

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• Add "saveSession" command - fixes igvteam#1010

  jrobinso

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• check IGV directory before oAuth options. Fixes igvteam#947

  jrobinso

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  a7b487c

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• NPE checks in bisulfite rendering code. Fixes issue igvteam#1024

  jrobinso

  committed
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• Display error message (once) on failed alignment query. See igvteam#1021

  jrobinso

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• Bypass search for alignment track coverage file (tdf) for dropbox urls, it won't work.

  jrobinso

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Commits on Sep 8, 2021

• Add tests for json validation when creating genome list. Fixes igvteam#1022

  jrobinso

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• Override Swing max panel height of 32767/2 for DataPanel. Fixes igvteam#981

  jrobinso

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• NPE protection on FeatureTrack.loadFeatures

  jrobinso

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