Name: Jacob Krucinski
Affiliation: Department of Computer Science, LTH, Lund, Sweden
Email: [email protected]
This README describes the codebase I developed for the following sub-projects:
- Hyperparameter Tuning of BioGPT
- Free-form Text Relation Extraction with BioGPT
- SciBERT Finetuning with Combined ChemProt and Drugprot Corpora, a continuation of a previous student's work found here
These bullets are hyperlinks to the sub-project specifc READMEs with documentation on setup, files, usage, and saved results.
A detailed logbook can be found here: Jacob_Krucinski_EDAN70_Log.ipynb and final report can be found here
The best way to run these Python scripts is to set up a virtual enviroment using Anaconda or Miniconda. The basics are available on this page.