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salmon_demo.ows
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<?xml version="1.0" ?><scheme description="" title="salmon-demo" version="2.0">
<nodes>
<node id="0" name="SalmonIndex" position="(622.0, 317.0)" project_name="salmon-demo" qualified_name="salmon_demo.OWSalmonIndex.OWSalmonIndex" title="SalmonIndex" version=""/>
<node id="1" name="gnumeric" position="(968.0, 243.0)" project_name="salmon-demo" qualified_name="salmon_demo.OWgnumeric.OWgnumeric" title="View quantification for one sample" version=""/>
<node id="2" name="SalmonQuant" position="(798.0, 244.0)" project_name="salmon-demo" qualified_name="salmon_demo.OWSalmonQuant.OWSalmonQuant" title="SalmonQuant" version=""/>
<node id="3" name="Start" position="(255.0, 236.0)" project_name="salmon-demo" qualified_name="salmon_demo.OWStart.OWStart" title="Start" version=""/>
<node id="4" name="downloadURL" position="(460.0, 147.0)" project_name="salmon-demo" qualified_name="salmon_demo.OWdownloadURL.OWdownloadURL" title="Download samples FASTQ files" version=""/>
<node id="5" name="downloadURL" position="(460.0, 316.0)" project_name="salmon-demo" qualified_name="salmon_demo.OWdownloadURL.OWdownloadURL" title="Download FASTA file" version=""/>
</nodes>
<links>
<link enabled="true" id="0" sink_channel="Trigger" sink_node_id="1" source_channel="trigger" source_node_id="2"/>
<link enabled="true" id="1" sink_channel="index" sink_node_id="0" source_channel="index" source_node_id="3"/>
<link enabled="true" id="2" sink_channel="trigger" sink_node_id="0" source_channel="directory" source_node_id="5"/>
<link enabled="true" id="3" sink_channel="mates2" sink_node_id="2" source_channel="mate_2" source_node_id="3"/>
<link enabled="true" id="4" sink_channel="mates1" sink_node_id="2" source_channel="mate_1" source_node_id="3"/>
<link enabled="true" id="5" sink_channel="trigger" sink_node_id="2" source_channel="directory" source_node_id="4"/>
<link enabled="true" id="6" sink_channel="index" sink_node_id="2" source_channel="index" source_node_id="0"/>
<link enabled="true" id="7" sink_channel="directory" sink_node_id="4" source_channel="work_dir" source_node_id="3"/>
<link enabled="true" id="8" sink_channel="URL" sink_node_id="4" source_channel="sample_dl_links" source_node_id="3"/>
<link enabled="true" id="9" sink_channel="directory" sink_node_id="5" source_channel="work_dir" source_node_id="3"/>
<link enabled="true" id="10" sink_channel="outputDirs" sink_node_id="2" source_channel="output" source_node_id="3"/>
</links>
<annotations>
<text font-family="Helvetica" font-size="16" id="0" rect="(230.0, 412.0, 775.0, 197.0)" type="text/plain">Salmon tutorial website:
https://combine-lab.github.io/salmon/getting_started/
Project PRJDB2508 (Arabidopsis thaliana) samples list:
https://www.ebi.ac.uk/ena/browser/view/PRJDB2508
FASTA file link:
ftp://ftp.ensemblgenomes.org/pub/plants/release-28/fasta/arabidopsis_thaliana/cdna/Arabidopsis_thaliana.TAIR10.28.cdna.all.fa.gz -o athal.fa.gz</text>
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