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AUS
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  - PGM_aux.py
  - PGM_saSampler.py
  - PGS_clsCompile.py
  - PGS_clsCompileML.py
  - PGS_clsCrunch.sh
  - PGS_clsUnify.py
  - PGS_clsUnifyML.py
  - PGS_dtaDICE.py
  - PGS_dtaExplore.py
  - PGS_dtaHeatmap.py
  - PGS_dtaHeatmapAxis.py
  - PGS_dtaHeatmapExplore.py
  - PGS_dtaTraces.py
  - PGS_fullCrunch.sh
  - PGS_gene.py
  - PGS_gene_FMS3.py
  - PGS_gene_FMS4.py
  - PGS_gene_FMS5.py
  - PGS_gene_IIT.py
  - PGS_gene_PGS.py
  - PGS_gene_RDF.py
  - PGS_gene_RDL.py
  - PGS_mlrHeatmap.py
  - PGS_mlrHeatmapSweep.py
  - PGS_mlrInspectML.py
  - PGS_mlrMethods.py
  - PGS_mlrTrainML.py
  - PGS_mlrTrainMLClean.py
  - PGS_mlrTrainMLCleanQNT.py
  - PGS_mlrTrainMLKeras.py
  - PGS_preCrunch.sh
  - PGS_preProcess.py
  - PGS_preTraces.py
  - PGS_pstCrunch.sh
  - PGS_pstFraction.py
  - PGS_pstProcess.py
  - PGS_pstProcessML.py
  - PGS_saAnalyzer.py
  - PGS_saPlotter.py
  - README.md
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- README.md
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README.md

PGM

PMG Adding new folder for improved pgSIT ML

Apr 5, 2023

fa6fc6c · Apr 5, 2023

Name	Name	Last commit message	Last commit date
parent directory ..
PGM_aux.py	PGM_aux.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGM_saSampler.py	PGM_saSampler.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_clsCompile.py	PGS_clsCompile.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_clsCompileML.py	PGS_clsCompileML.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_clsCrunch.sh	PGS_clsCrunch.sh	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_clsUnify.py	PGS_clsUnify.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_clsUnifyML.py	PGS_clsUnifyML.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_dtaDICE.py	PGS_dtaDICE.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_dtaExplore.py	PGS_dtaExplore.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_dtaHeatmap.py	PGS_dtaHeatmap.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_dtaHeatmapAxis.py	PGS_dtaHeatmapAxis.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_dtaHeatmapExplore.py	PGS_dtaHeatmapExplore.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_dtaTraces.py	PGS_dtaTraces.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_fullCrunch.sh	PGS_fullCrunch.sh	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_gene.py	PGS_gene.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_gene_FMS3.py	PGS_gene_FMS3.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_gene_FMS4.py	PGS_gene_FMS4.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_gene_FMS5.py	PGS_gene_FMS5.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_gene_IIT.py	PGS_gene_IIT.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_gene_PGS.py	PGS_gene_PGS.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_gene_RDF.py	PGS_gene_RDF.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_gene_RDL.py	PGS_gene_RDL.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_mlrHeatmap.py	PGS_mlrHeatmap.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_mlrHeatmapSweep.py	PGS_mlrHeatmapSweep.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_mlrInspectML.py	PGS_mlrInspectML.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_mlrMethods.py	PGS_mlrMethods.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_mlrTrainML.py	PGS_mlrTrainML.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_mlrTrainMLClean.py	PGS_mlrTrainMLClean.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_mlrTrainMLCleanQNT.py	PGS_mlrTrainMLCleanQNT.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_mlrTrainMLKeras.py	PGS_mlrTrainMLKeras.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_preCrunch.sh	PGS_preCrunch.sh	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_preProcess.py	PGS_preProcess.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_preTraces.py	PGS_preTraces.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_pstCrunch.sh	PGS_pstCrunch.sh	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_pstFraction.py	PGS_pstFraction.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_pstProcess.py	PGS_pstProcess.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_pstProcessML.py	PGS_pstProcessML.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_saAnalyzer.py	PGS_saAnalyzer.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
PGS_saPlotter.py	PGS_saPlotter.py	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023
README.md	README.md	PMG Adding new folder for improved pgSIT ML	Apr 5, 2023

README.md

pgSITv2

Parameters

ren: Number of releases
res: Size of releases
rei: Releases interval
pct: Cutting rate
pmd: Maternal deposition
mfr: Male fertility
mtf: Mating fitness
fvb: Female viability

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