From 7ec32618770b4f1886fb3c6f5a997b3c44edb6ad Mon Sep 17 00:00:00 2001 From: Heng Li Date: Tue, 3 May 2016 11:28:58 -0400 Subject: [PATCH] r1134: use AH:* instead of AH:Y --- bwa.c | 2 +- main.c | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/bwa.c b/bwa.c index c8dd0155..c78ebb67 100644 --- a/bwa.c +++ b/bwa.c @@ -381,7 +381,7 @@ void bwa_print_sam_hdr(const bntseq_t *bns, const char *hdr_line) if (n_SQ == 0) { for (i = 0; i < bns->n_seqs; ++i) { err_printf("@SQ\tSN:%s\tLN:%d", bns->anns[i].name, bns->anns[i].len); - if (bns->anns[i].is_alt) err_printf("\tAH:Y\n"); + if (bns->anns[i].is_alt) err_printf("\tAH:*\n"); else err_fputc('\n', stdout); } } else if (n_SQ != bns->n_seqs && bwa_verbose >= 2) diff --git a/main.c b/main.c index e17da143..f199f431 100644 --- a/main.c +++ b/main.c @@ -4,7 +4,7 @@ #include "utils.h" #ifndef PACKAGE_VERSION -#define PACKAGE_VERSION "0.7.13-r1130-dirty" +#define PACKAGE_VERSION "0.7.13-r1134-dirty" #endif int bwa_fa2pac(int argc, char *argv[]);