Inherit tailored preconditioning matrix even in the case of complex s… #473
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: build-macos-homebrew | |
| on: | |
| workflow_dispatch: | |
| push: | |
| paths-ignore: | |
| - '**.nix' | |
| - 'flake.lock' | |
| pull_request: | |
| paths-ignore: | |
| - '**.nix' | |
| - 'flake.lock' | |
| concurrency: ci-macos-homebrew-${{ github.ref }} | |
| jobs: | |
| macos-homebrew: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| # Allow other runners in the matrix to continue if some fail | |
| fail-fast: false | |
| matrix: | |
| os: [macos-14, macos-13] | |
| steps: | |
| - name: get CPU information | |
| run: | | |
| sysctl hw | |
| sysctl machdep | |
| - name: checkout repository | |
| uses: actions/checkout@v4 | |
| - name: install dependencies | |
| # Homebrew's Python conflicts with the Python that comes pre-installed | |
| # on the GitHub runners. Some of the dependencies depend on different | |
| # versions of Homebrew's Python. Enforce using the ones from Homebrew | |
| # to avoid errors on updates. | |
| # See: https://github.com/orgs/Homebrew/discussions/3928 | |
| # It looks like "gfortran" isn't working correctly unless "gcc" is | |
| # re-installed. | |
| run: | | |
| brew update | |
| brew install --overwrite [email protected] [email protected] | |
| brew reinstall gcc | |
| brew install \ | |
| cmake libomp openblas open-mpi suitesparse \ | |
| qwt vtk opencascade | |
| echo "HOMEBREW_PREFIX=$(brew --prefix)" >> $GITHUB_ENV | |
| - name: configure | |
| env: | |
| LDFLAGS: -L${{ env.HOMEBREW_PREFIX }}/opt/libomp/lib -lomp | |
| run: | | |
| mkdir ${GITHUB_WORKSPACE}/build | |
| cd ${GITHUB_WORKSPACE}/build | |
| cmake \ | |
| -DCMAKE_BUILD_TYPE="Release" \ | |
| -DCMAKE_C_COMPILER=clang \ | |
| -DCMAKE_CXX_COMPILER=clang++ \ | |
| -DCMAKE_Fortran_COMPILER=gfortran \ | |
| -DCMAKE_INSTALL_PREFIX="${GITHUB_WORKSPACE}/usr" \ | |
| -DBLA_VENDOR="OpenBLAS" \ | |
| -DCMAKE_PREFIX_PATH="${HOMEBREW_PREFIX}/opt/libomp;${HOMEBREW_PREFIX}/opt/openblas;${HOMEBREW_PREFIX}/opt/qt;${HOMEBREW_PREFIX}/opt/qwt" \ | |
| -DWITH_OpenMP=ON \ | |
| -DOpenMP_C_FLAGS="-Xclang -fopenmp -I${HOMEBREW_PREFIX}/opt/libomp/include" \ | |
| -DOpenMP_CXX_FLAGS="-Xclang -fopenmp -I${HOMEBREW_PREFIX}/opt/libomp/include" \ | |
| -DOpenMP_Fortran_FLAGS="-fopenmp -I${HOMEBREW_PREFIX}/opt/libomp/include" \ | |
| -DWITH_LUA=ON \ | |
| -DWITH_MPI=ON \ | |
| -DMPI_TEST_MAXPROC=2 \ | |
| -DWITH_Zoltan=OFF \ | |
| -DWITH_Mumps=OFF \ | |
| -DWITH_CHOLMOD=ON \ | |
| -DWITH_ElmerIce=ON \ | |
| -DWITH_ELMERGUI=ON \ | |
| -DWITH_QT6=ON \ | |
| -DQWT_INCLUDE_DIR="${HOMEBREW_PREFIX}/opt/qwt/lib/qwt.framework/Headers" \ | |
| -DWITH_VTK=ON \ | |
| -DWITH_OCC=ON \ | |
| -DWITH_MATC=ON \ | |
| -DWITH_PARAVIEW=ON \ | |
| -DCREATE_PKGCONFIG_FILE=ON \ | |
| .. | |
| - name: build | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/build | |
| cmake --build . -j$(sysctl -n hw.logicalcpu) | |
| - name: install | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/build | |
| cmake --install . | |
| - name: check | |
| id: run-ctest | |
| timeout-minutes: 150 | |
| env: | |
| CTEST_OUTPUT_ON_FAILURE: 1 | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/build | |
| ctest . \ | |
| -LE slow \ | |
| -j$(sysctl -n hw.logicalcpu) \ | |
| --timeout 300 | |
| - name: re-run tests | |
| if: always() && (steps.run-ctest.outcome == 'failure') | |
| timeout-minutes: 60 | |
| env: | |
| CTEST_OUTPUT_ON_FAILURE: 1 | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/build | |
| # get names of failed tests and strip potential "_np*" suffix | |
| failed_tests=($(ctest . -N --rerun-failed | grep -E "Test\s+#.*" | awk '{print $3}' | sed -e 's/_np[0-9]*$//g')) | |
| # remove duplicate test names | |
| unique_failed_tests=($(echo "${failed_tests[@]}" | tr ' ' '\n' | sort -u | tr '\n' ' ')) | |
| for test in "${unique_failed_tests[@]}"; do | |
| # check if test is from fem or ElmerIce | |
| if [ -d fem/tests/${test} ]; then | |
| test_root=fem/tests | |
| else | |
| test_root=elmerice/Tests | |
| fi | |
| echo "::group::Content of ${test_root}/${test}" | |
| echo ---- Files ---- | |
| ls -Rl ${test_root}/${test} | |
| if [ -f ${test_root}/${test}/test-stderr*.log ]; then | |
| echo ---- Content of test-stderr*.log ---- | |
| cat ${test_root}/${test}/test-stderr*.log | |
| fi | |
| if [ -f ${test_root}/${test}/test-stdout*.log ]; then | |
| echo ---- Content of test-stdout*.log ---- | |
| cat ${test_root}/${test}/test-stdout*.log | |
| fi | |
| echo "::endgroup::" | |
| done | |
| echo "::group::Re-run failing tests" | |
| ctest --rerun-failed --output-on-failure --timeout 180 || true | |
| echo "::endgroup::" | |
| echo "::group::Log from these tests" | |
| [ ! -f Testing/Temporary/LastTest.log ] || cat Testing/Temporary/LastTest.log | |
| echo "::endgroup::" |