diff --git a/docs/ecosystem.rst b/docs/ecosystem.rst index a5fbb46ebf..d38c514332 100644 --- a/docs/ecosystem.rst +++ b/docs/ecosystem.rst @@ -96,3 +96,9 @@ Analyses using curated prior knowledge * `Cubé `__ :small:`Harvard University` | Intuitive Nonparametric Gene Network Search Algorithm that learns from existing biological pathways & multiplicative gene interference patterns. + +Spatial Transcriptomics Tools +------------------------------- +* `PASTE `__ :small:`Princeton` + + | PASTE is a computational method to align and integrate spatial transcriptomics data across adjacent tissue slices by leveraging both gene expression similarity and spatial distances between spots. diff --git a/docs/release-notes/1.8.2.rst b/docs/release-notes/1.8.2.rst index bb7fc46b55..3283de373e 100644 --- a/docs/release-notes/1.8.2.rst +++ b/docs/release-notes/1.8.2.rst @@ -6,3 +6,7 @@ - Fix plotting after :func:`scanpy.tl.filter_rank_genes_groups` :pr:`1942` :smaller:`S Rybakov` .. rubric:: Performance enhancements + +.. rubric:: Ecosystem + +- Added PASTE (a tool to align and integrate spatial transcriptomics data) to scanpy ecosystem.