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Change Log

.. toctree::

2.3

2020-03-22

  • Support for python 2.7 has ended.
  • Introduce Base() class from which all classes inherit the following two methos: get_cache_file_age() and get_cache_file_mdate().
  • In all classes, refresh parameter accepts an integer which will refresh the cached file if the last modification date is longer than that number of days ago.
  • Provide extensive affiliation information in AuthorRetrieval().affiliation_current and AuthorRetrieval().affiliation_history as namedtuples.
  • Provide more robust example of the "Download Machine" in the documentation.
  • Fix typos and formatting errors in the documentation.
  • In AbstractRetrieval().__str__, fix bug due to missing authors and affiliations.

2.2.2

2019-12-29

  • EIDs starting with "1-s2.0-" are automatically detected as EID as well.
  • In ScopusSearch().results add field "subtypeDescription".
  • In AbstractRetrieval().idxterms return None instead of empty lists.
  • In AbstractRetrieval().confdate return None instead of list with tuples with None.
  • Add UserWarning for change of type of AuthorRetrieval().affiliation_current and AuthorRetrieval().affiliation_history.

2.2.1

2019-09-09

  • Add user agent string to evaluate usage.
  • Fix bug with missing journal metrics in SerialTitle().

2.2

2019-08-21

  • Add parameters integrity_fields and integrity_action to all search classes to avoid KeyErrors of missing fields.
  • Add progress bar to all search classes indicating download progress.
  • Fix bug with missing entries in author-group list in AbstractRetrieval().

2.1.3

2019-07-16

  • Fix bug detecting DOIs without slash in AbstractRetrieval().
  • Fix bug related to creating the config file.

2.1.2

2019-07-09

  • Fix bugs arising from passing duplicate parameters through kwds in Search classes.
  • Fix bug in AbstractRetrieval().references with duplicte volume/issue information from Scopus.
  • Fix bug with wrong object type when using AuthorRetrieval().get_coauthors().

2.1.1

2019-06-26

  • New properties for AbstractRetrieval(): pii and pubmed_id.
  • Improve documentation (AbstractRetrieval().idxterms and download machine).
  • Fix bug forcing the presence of the package scopus.

2.1.0

2019-06-17

  • Rename package to pybliometrics
  • In all search classes, properties return None if download=False instead of raising an error.

2.0.1

2019-06-08

  • In AbstractRetrieval().references, add field "type" for the status of the parsed reference.
  • Raise proper Scopus.exception even when no Scopus-supplied error message exists.
  • In AbstractRetrieval(), update docstrings.
  • Fix bug related to creating the config when the config doesn't exist.
  • Fix bug when using AbstractRetrieval() in Python 2.

2.0

2019-05-28

  • Cache files in subfolders according to the used view.
  • Add method .estimate_uniqueness() to AuthorRetrieval() to estimate how unique an author profile is.
  • Use error message provided by Scopus for ScopusErrors.
  • Add tip how to deal with "KeyError: 'eid'".
  • Remove deprecated classes, modules, parameters and attributes. Removed deprecated classes are ScopusAbstract(), ScopusAffiliation(), ScopusAuthor() and report(). Removed deprecated parameters are start and max_entries in AuthorSearch() and AffiliationSearch(). Removed deprecated attributes include only ScopusSearch.EIDS.

1.6.1

2019-05-14

  • Add support for proxies.
  • In AbstractRetrieval.correspondence, turn values into proper strings.
  • Fix bug when creating the config file.

1.6

2019-05-09

  • SerialTitle class to access the Serial Title API.
  • In all search classes, add method .get_results_size() to return the number of matches.
  • In all search classes, add boolean parameter download to not download the results (but get the number of matches anyways).
  • In AbstractRetrieval.authogroup, rename field "city-group" to "city" and add new fields: "dptid", "postalcode", "addresspart".
  • In AbstractRetrieval.authorgroup, fix bug with missing affiliation information.
  • In all search classes, remove deprecated paramter start.

1.5

2019-05-16

  • Add parameter subscriber to ScopusSearch class to set request parameters to maximum values depending on view.
  • Add support for cursor-navigation in searches.
  • Add __citation__ dunder.
  • Allow for the REF view in AbstractRetrieval to obtain detailed information on referenced items.
  • New properties for AuthorRetrieval: historical_identifier and status.
  • Allow ScopusSearch to pass on kwds as query params.
  • Deprecate start and max_entries parameters in AffiliationSearch and AuthorSearch.
  • Deprecate start parameter in ScopusSearch class.
  • Fix bug with ContentAffiliationRetrieval.__str__.
  • Fix bugs in AbstractRetrieval related to missing information obtained from Scopus.

1.4.3

2019-02-12

  • Fix bug with empty value in AbstractRetrieval.language.
  • Add matplotlib as requirement.

1.4.2

2019-02-05

  • Fix bug with TypeErrors when navigating a path in the json.
  • Fix bug with missing author information in AbstractRetrieval.authors.
  • Fix bug with missing title in AbstractRetrieval.title.

1.4.1

2019-01-24

  • Add citation
  • Render reports class deprecated.
  • Add str-magic function for CitationOverview class.

1.4

2019-01-17

  • Use number of results from first search query rather than from separate query.
  • Write empty file if search is empty.
  • In ScopusSearch.results, add new fields: affilname, affiliation_city, affiliation_country, article_number, author_count, authkeywords, eIssn, description, fund_acr, fund_no, fund_sponsor, pubmed_id.
  • In ScopusSearch.results, rename the following fields: names to author_names, authid to author_ids, afid to author_afids.
  • In ScopusSearch, add parameter view to specify the view and number of entries per query run.
  • In AbstractRetrieval.affiliation, AbstractRetrieval.authorgroup, AbstractRetrieval.authors, AbstractRetrieval.subject_areas, AffiliationSearch.affiliations, AuthorRetrieval.classificationgroup, AuthorRetrieval.journal_history, AuthorRetrieval.name_variants, AuthorSearch.authors, CitationOverview.authors and ScopusSearch.results return None if the result list is empty, instead of an empty list.
  • In AbstractRetrieval.chemicals, fix bug with missing values for cas-registry-number.
  • Allow for the STANDARD view in ScopusSearch to increase number of results per query.
  • Refactor all classes internally for maintainability and readability.
  • Register project with Code Climate.

1.3.1

2018-12-11

  • Extend tests for ScopusSearch.
  • Fix bug with zero search results.
  • Open cached search files in binary mode.
  • Fix bug in AbstractRetrieval with missing affiliation names in .authorgroup.

1.3

2018-12-04

  • Fix bugs related to empty values or missing keys in AuthorRetrieval (.affiliation_history, .get_coauthors(), .journal_history, .name_variant, referred_name, .subject_area) and in ScopusSearch (.results).
  • Introduce Retrieval() superclass for all retrieval and content classes.
  • Refactor Search() superclass and all search classes internally.
  • Implement scopus-specific exceptions.

1.2

2018-10-24

  • In AbstractRetrieval, users can now initate the class with DOI, Scopus ID, PII or Pubmed ID. Parameter EID has hence been deprecatd in favor of the new parameter identifier.
  • New properties for AbstractRetrieval: chemicals, contributor_group, funding, funding_text, isbn, sequencebank.
  • In ContentAffiliationRetrieval, return None rather than empty dict when no address is provided.
  • In AbstractRetrieval.confsponsor, return None when no confsponsor is provided.
  • In ScopusSearch.results, return "afid" as part of namedtuple.
  • Fix bug in AbstractRetrieval.authorgroup related to affiliation groups without authors.
  • Fix bug in AbstractRetrieval.affiliation related to affiliations without Scopus ID.
  • Fix bugs in ScopusSearch.results with duplicate authors, missing titles and unusual coverDates.
  • AuthorRetrieval warns User via UserWarnings if the supplied author ID is outdated or if it has been forwarded to a new profile.

1.1

2018-10-07

  • Generate configuration file via separate method, not directly on import.

1.0

2018-10-06

  • New class AbstractRetrieval to replace ScopusAbstract, with the following properties renamed: affiliations: affiliation, bibtex: get_bibtex(), citationLanguage: language, citationType: srctype, citingby_url: citingby_link, html: get_html(), ris: get_ris(), latex: get_latex(), scopus_url: scopus_link, subjectAreas: subject_areas
  • New class AuthorRetrieval to replace ScopusAuthor, with the following properties renamed: author_id: identifier, coauthor_url: coauthor_link, current_affiliation: affiliation_current, firstname: given_name, hindex: h_index, lastname: surname, name: indexed_name, ncited_by: cited_by_count, ncoauthors: coauthor_count, ndocuments: document_count, publication_history: journal_history
  • New class ContentAffiliationRetrieval to replace ScopusAffiliation, with the following properties renamed: api_url: self_link, nauthors: author_count, ndocuments: document_count, name: affiliation_name, org_url: org_URL, scopus_id: identifier
  • Rewrite class ScopusSearch: new property results, cache search results in json format with hex-ed filename and new method get_eids(), which replaces property EIDS
  • Use config.ini to store API Key (and if necessary, InstToken) as well as directories
  • Migration Guide to update code from scopus 0.x to 1.x

0.10

2018-08-14

  • In ScopusAuthor, refactor generating abstracts lists into get_journal_abstract().
  • New properties for ScopusAbstract: citedby_url and scopus_url
  • New property for ScopusAffiliation: state
  • Correct property citedby_url from ScopusAuthor.
  • In all retrieval classes, remove underscore properties.

0.9

2018-07-23

  • SearchAffiliation to access the Affiliation Search API.
  • Fix bug occuring with fields of length one in Author search.
  • ScopusAbstract returns abstract keywords if present.
  • Refactor search classes to inherit from common auxiliary class.
  • ScopusAffiliation now accepts EID as well.

0.8

2018-06-18

  • ScopusAuthor now accepts EID as well.
  • Fix bug occuring with non-existent journal abbreviations.
  • SearchAuthor class to access the Author Search API.
  • Fix links in examples.

0.7

2018-04-27

  • Use https instead of http wherever possible.
  • Add support for InstToken Authentication via config file.
  • Redirect DOI links to preferred resolver.

0.6

2017-12-12

  • CitationOverview class to access the Abstract Citation View.

0.5

2017-09-28

  • New properties for ScopusAuthor: publication_history and subject_areas.
  • Update namespace in ScopusAbstract to retrieve affiliation information.
  • Complete affiliation information in ScopusAbstract.

0.4.4

2017-09-06

  • Fix bugs related to unicode on Python2.7 and installation on Windows.

0.4.3

2017-08-30

  • Update ScopusAbstract to reflect change in the API.

0.4.2

2017-08-23

  • Fix bug with generating my_scopus.py on Python 3.
  • In ScopusAbstract, do not raise TypeErrors for information not present in current view.

0.4.1

2017-08-20

  • Remove unwanted print() statement.

0.4

2017-08-20

  • Use refresh_affiliation parameter in ScopusAuthor.
  • Improve background service to load user's API key.
  • Ask user for API key if it can't be found.
  • New property for ScopusAbstract: citation_count.

0.3.1

2017-08-09

  • Update ScopusAbstract to reflect change in the API.

0.3.0

2017-08-02

  • Few bugfixes.
  • New property for ScopusAbstract: abstract.
  • Change latex key in ScopusAbstract.bibtex to <FirstauthorYearTitlefirstwordTitlelastword>
  • Raise ValueError in ScopusAbstract if .bibtex or .ris is called on an item whose aggregationType is not Journal.
  • Improved docstrings for ScopusAbstract.
  • New properties for ScopusAffiliation: api_url, date_created, org_type, org_domain, org_url.
  • In ScopusAffiliation, the affiliation_id returns the Scopus Affiliation ID from the result rather than the used aff_id.

0.2.1

2017-07-21

  • Some bugfixes.
  • Examples for all classes.
  • Fix typos in docstrings.
  • In ScopusAuthor, the author_id returns the Scopus Author ID from the result rather than the used author_id.

0.2.0

2017-04-05

  • Several bugfixes.
  • Docstrings for all classes according to numpy standard.
  • Outsourced help functions in module utils.
  • Import classes in __init__ to allow top level import.
  • New methods for ScopusAuthor: n_yearly_publications().
  • New properties for ScopusAbstract: citationType, citationLanguage, refcount, references, subjectAreas, website.
  • Raising exception when download status is not ok.
  • Python2.7 compatibility.

0.1.0

2016-02-22

  • Initial release.