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Implement set of DMS experiment results as static optimization problems #255

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RMichae1 opened this issue Sep 12, 2024 · 4 comments
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@RMichae1
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RMichae1 commented Sep 12, 2024

  1. GB1 Problem -- see: https://www.sciencedirect.com/science/article/pii/S2405471223002107?via%3Dihub
  2. TrpB Problem -- combinatorially complete on active site

As discussed 12-09-2024 JC BioML

@miguelgondu
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One idea: we could save large assets in poli-assets.

@miguelgondu
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@RMichae1, do you want to take the lead on this one?

@RMichae1 RMichae1 self-assigned this Sep 20, 2024
@RMichae1
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RMichae1 commented Oct 7, 2024

It looks like the fitness.csv target assets from the ALDE, and source papers are sufficiently small (few MB), to be added as files directly.

The GitHub LFS solution seems overkill for this particular problem.

Should we still implement the solution with LFS in mind @miguelgondu ?

@miguelgondu
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I'm down to have them as assets directly. We can optimize later on when we find the need.

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