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Update of SNOMED Veterinary

Prerequisites:

  • Schema DevV5 with copies of tables concept, concept_relationship and concept_synonym from ProdV5, fully indexed.
  • Working directory SNOMED Veterinary.
  • SNOMED must be loaded first.
  1. Run create_source_tables.sql
  2. Download the Veterinary Extension of SNOMED CT file SnomedCT_Release_VTSzzzzzzz_yyyymmdd.zip from https://vtsl.vetmed.vt.edu/extension/
  3. Extract the following files from the folder \Full\Terminology:
  • sct2_Concept_Full_VTS_YYYYMMDD.txt
  • sct2_Description_Full_en_VTS_YYYYMMDD.txt
  • sct2_Relationship_Full_VTS_YYYYMMDD.txt Rename files to sct2_Concept_Full_VTS.txt, sct2_Description_Full_VTS.txt, sct2_Relationship_Full_VTS.txt
  1. Extract der2_cRefset_AssociationReferenceFull_VTS_YYYYMMDD.txt from SnomedCT_Release_VTSzzzzzzz\Full\Refset\Content Rename to der2_cRefset_AssociationFull_VTS.txt

  2. Run in devv5 (with fresh vocabulary date and version): SELECT sources.load_input_tables('SNOMED Veterinary',TO_DATE('20181001','YYYYMMDD'),'SNOMED Veterinary 20181001');

  3. Run load_stage.sql

  4. Run generic_update: devv5.GenericUpdate();