taxodium.proto

syntax = "proto3";
package Taxodium;

message MutationList{
	repeated int32 mutation = 1;
}

message MetadataSingleValuePerNode{
	string metadata_name = 1;
	string metadata_title = 2;
	repeated string mapping = 3;
	repeated int32 node_values = 4;
}

message AllNodeData {
	repeated string names = 1;
	repeated float x = 2;
	repeated float y = 3;
	repeated int32 countries = 4;//Deprecated: DO NOT USE (use metadata_singles)
	repeated int32 dates = 7;
	repeated int32 lineages = 5;//Deprecated: DO NOT USE (use metadata_singles)

	repeated MutationList mutations = 6; 
	repeated int32 parents = 8;
	repeated string genbanks = 9;
	repeated int32 epi_isl_numbers = 10;
	repeated int32 num_tips = 11;
	repeated MetadataSingleValuePerNode metadata_singles = 12;

}


message AllData{
	AllNodeData node_data= 1;
	repeated string country_mapping = 2;//Deprecated: DO NOT USE (use metadata_singles above)
	repeated string lineage_mapping = 3; //Deprecated: DO NOT USE (use metadata_singles above)
	repeated string mutation_mapping = 4;
	repeated string date_mapping = 5;
	string tree_description = 6;
	string tree_title = 7;
}