Overhaul structure

As it is now (Feb 1, 2016) the code is very hard to reconfigure. I will try to rewrite it in an intelligent way to allow for easy configuration at a later time.

CellDiv

Input

Force-field parameters

All the force field parameters

Cell Geometry

Padding?

Number of nodes?

Division Algorithm Selection?

GPU Selection?

Multiple GPU?

Which GPU?

Simulation parameters

Number of Cellls

Boundary Conditions

Output to disk

Initialization

Simulation

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