Relative scripts and files to Manuscript: link to biorxive
The data needed to reproduce the results of the manuscript are available at
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code: The folder contains scripts for differential expression, gene set analysis and correlation analysis.
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data: The folder contains raw counts, TPM and inputs for gene set analysis. Note that ro reproduce all results you will first need to retrieve the larger data files from the associated Zenodo repository prior to re-running the analyses. This is described in further detail by the README in the data directory.