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Issues list

"EXTID2PATHID" error in DOSE
#86 opened Dec 18, 2024 by carlossainz813
Error in get("DOLite2EG") : object 'DOLite2EG' not found when re-run enrichDO
#85 opened Sep 1, 2024 by zxy0912
1
Error in findPathClusters(enrich, cluster = "hier", minClusterSize = 3) : could not find function "findPathClusters"
#81 opened Dec 27, 2023 by MANZHAOHUI
8 tasks
1
MPO.db installation error
#78 opened Oct 26, 2023 by eudoraleer
6
Seed used in GSEA_fgsea is (almost always) the same
#76 opened Jul 20, 2023 by vgilbart
drimseq-error
#72 opened Jan 4, 2023 by pragathi-sneha
How to add only needed enriched terms in dotplot or cnetplot
#64 opened Jun 2, 2022 by pragathi-sneha
1
[Feature Request] Allow conversion to columns other than hgnc symbol
#63 opened Mar 2, 2022 by Nelson-Gon
8 tasks done
Universal background gene list used in enricher function
#62 opened Jan 12, 2022 by merckey
1
Rationale for decreasing order only in GSEA
#58 opened Dec 2, 2021 by Nelson-Gon
6 of 8 tasks
4
DO.db过于老旧
#57 opened Nov 17, 2021 by GuangchuangYu
2
own genelist; too dump top proceed
#55 opened Oct 20, 2021 by mocherry
3
enricher_internal.R code may have mistake
#52 opened Aug 20, 2021 by tangmaomao16
1
Saving separate dotplots with for loop
#48 opened Mar 18, 2021 by mirkocelii
1
bug in DOSE:::gseaScores - Error in if (abs(max.ES) > abs(min.ES))
#46 opened Feb 2, 2021 by therealgenna
9
Issues w/expected input genes
#35 opened Aug 10, 2020 by jinkinson
3
Error: object 'upsetplot' not found
#31 opened Feb 18, 2020 by TimJCooper
1
Some problems about 'maxGSSize' parameter in enricher_interval series function
#28 opened Nov 4, 2019 by huangwb8
1
information content calculation discordance
#27 opened Feb 12, 2019 by ieiwk
8 tasks
P-value cutoff _also_ applied to adjusted P-value
#26 opened Jan 7, 2019 by kevinrue
GSEA result p.adjust vs qvalue
#24 opened May 25, 2018 by mgandal
Update to DisGeNet 5?
#22 opened Dec 11, 2017 by tonigi
2
Disrepancy GSEA results when using by="DOSE" or by="fgsea"
#18 opened Nov 14, 2016 by guidohooiveld
3
ProTip! Adding no:label will show everything without a label.