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Commits on Oct 20, 2021

• Bump version

  tseemann

  committed
  7c68056

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• delete old schemes

  tseemann

  committed
  68c5973

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• New pubmlst 2021-10-21

  tseemann

  committed
  c133709

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• extra BLAST index files

  tseemann

  committed
  e49647f

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• exclude vcholrae_2

  tseemann

  committed
  0ce47e5

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Commits on Apr 6, 2021

• Merge branch 'master' of https://github.com/tseemann/mlst

  tseemann

  committed
  c0ae3f3

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• Allow non numeric ST names

  tseemann

  committed
  76bf11a

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Commits on Aug 3, 2020

• Add code of conduct

  andersgs

  authored
  48bc24a

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Commits on Feb 24, 2020

• Major change to --json output

  tseemann

  committed
  c8efc37

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Commits on Feb 16, 2020

• Issue tseemann#80 - scheme folder and name must match

  tseemann

  committed
  ff75805

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Commits on Jan 30, 2020

• update pubmlst dbs - 30 Jan 2020

  tseemann

  committed
  fb8f33e

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Commits on Nov 11, 2019

• Bump to 2.18.0

  tseemann

  committed
  8b5462b

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• Fix logic to handle BLAST+ 2.10 version

  tseemann

  committed
  68e8d5e

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Commits on Oct 18, 2019

• Update PubMLST 2019-10-18

  tseemann

  committed
  44e8f5d

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Commits on Oct 7, 2019

• typo in message

  tseemann

  committed
  387f771

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Commits on Sep 6, 2019

• travis - multiple env: on same line

  tseemann

  committed
  62501c7

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• travis - fix wget -nc vs -N issue

  tseemann

  committed
  025c333

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• travis - cache blast tarball

  tseemann

  committed
  66f957a

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• Bump to 2.17.6

  tseemann

  committed
  e2675a3

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• perl use 5.26 directives

  tseemann

  committed
  bca9fbb

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• Fix conda install docs

  tseemann

  committed
  7a7e4de

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• travis test for mlst-show_seqs

  tseemann

  committed
  590a494

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• Tool to get alleles of given SCHEME + ST

  tseemann

  committed
  b4af87d

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• travis - wrong path to new test file

  tseemann

  committed
  0a234e0

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• Issue tseemann#86 | revcom novel alleles if -ve strand in genome

  tseemann

  committed
  24a33c9

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Commits on Sep 4, 2019

• Add tests for --novel and .bz2

  tseemann

  committed
  3bfd030

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• Normalize datadir/blastdb paths

  tseemann

  committed
  579a7ef

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• Use inbuilt basename

  tseemann

  committed
  99a1af1

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• Update all MLST DBs

  tseemann

  committed
  fdfd8fb

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• Handle locus errors in download fasta

  tseemann

  committed
  e7afa3e

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• Issue tseemann#35 | simplify by using any2fasta

  tseemann

  committed
  b897fff

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• Need perl 5.26 or higher

  tseemann

  committed
  07a06c5

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• Require blastn 2.9.0 or higher

  tseemann

  committed
  1ee98b0

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• Require perl >= 5.16

  tseemann

  committed
  cbdc2c6

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• Issue tseemann#85 | fixed dupe --novel genes

  tseemann

  committed
  b124362

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