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7 stars written in C
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RNA-seq aligner

C 1,889 508 Updated Jun 28, 2024

A tool set for short variant discovery in genetic sequence data.

C 194 3 Updated May 4, 2021

Genotype and phase short tandem repeats using Illumina whole-genome sequencing data

C 95 31 Updated Feb 27, 2023

Standalone C library for assembling Illumina short reads in small regions

C 72 23 Updated Dec 15, 2022

Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes

C 59 20 Updated Nov 8, 2024

full taxonomer cython repository

C 22 6 Updated Dec 1, 2019

mreps: software for tandem repeat identification in DNA

C 14 5 Updated Nov 13, 2019