.gitignore

# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# Checkpoints
.ipynb_checkpoints

# Distribution / packaging
.Python
# Distribution / packaging
bin/
build/
develop-eggs/
dist/
eggs/
lib/
lib64/
parts/
sdist/
var/
*.egg-info/
.installed.cfg
*.egg

# Freeze

example_workflows/xrf_PCA.ipynb
example_workflows/xrf_soft_kmeans.ipynb
example_workflows/xrf_old_segmenter.ipynb
example_workflows/xrf_old_annotator.ipynb
example_workflows/xrf_class_structure.ipynb
example_workflows/index_tracker.csv
beamtime_workflows/beamtime_data/
beamtime_workflows/fine_scans
# Directories
\additional
\raw_xrf_data
\annotated_XRF
\annotated_xrf_data\
\annotated_xrf_data\raw_cells\
\annotated_xrf_data\reject\
\annotated_xrf_data\accept\
\scratchpad
# exception to the rule
!annotated_xrf_data\.gitkeep
!annotated_xrf_data\accept\.gitkeep
!annotated_xrf_data\reject\.gitkeep
!annotated_xrf_data\raw_cells\.gitkeep

# Images
*.tif
*.tiff
*.jpg
*.jpeg

# data
*.h5

# files
Patches_tutorial.ipynb
patches2d_temp.py