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sessionInfo.txt
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sessionInfo.txt
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R version 4.0.3 (2020-10-10)
Platform: x86_64-conda-linux-gnu (64-bit)
Running under: Fedora 30 (Workstation Edition)
Matrix products: default
BLAS/LAPACK: /home/JAK75/anaconda3/envs/rbase4/lib/libopenblasp-r0.3.12.so
locale:
[1] LC_CTYPE=en_GB.UTF-8 LC_NUMERIC=C LC_TIME=en_GB.UTF-8 LC_COLLATE=en_GB.UTF-8
[5] LC_MONETARY=en_GB.UTF-8 LC_MESSAGES=en_GB.UTF-8 LC_PAPER=en_GB.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] grid stats4 parallel stats graphics grDevices utils datasets methods base
other attached packages:
[1] meta_4.18-2 corrplot_0.84 car_3.0-10 carData_3.0-4
[5] e1071_1.7-4 HGNChelper_0.8.1 limma_3.46.0 pheatmap_1.0.12
[9] MLmetrics_1.1.1 ROCR_1.0-11 caret_6.0-86 lattice_0.20-41
[13] rpart.plot_3.0.9 rpart_4.1-15 matrixStats_0.57.0 biomaRt_2.46.3
[17] trackViewer_1.26.2 EnsDb.Hsapiens.v86_2.99.0 ensembldb_2.14.0 AnnotationFilter_1.14.0
[21] GenomicFeatures_1.42.1 AnnotationDbi_1.52.0 Biobase_2.50.0 GenomicRanges_1.42.0
[25] GenomeInfoDb_1.26.2 IRanges_2.24.1 S4Vectors_0.28.1 AnnotationHub_2.22.0
[29] BiocFileCache_1.14.0 dbplyr_2.0.0 BiocGenerics_0.36.0 ggpubr_0.4.0
[33] readxl_1.3.1 knitr_1.30 forcats_0.5.0 stringr_1.4.0
[37] dplyr_1.0.2 purrr_0.3.4 readr_1.4.0 tidyr_1.1.2
[41] tibble_3.0.4 ggplot2_3.3.3 tidyverse_1.3.0
loaded via a namespace (and not attached):
[1] lme4_1.1-26 tidyselect_1.1.0 RSQLite_2.2.2
[4] htmlwidgets_1.5.3 BiocParallel_1.24.1 pROC_1.17.0.1
[7] munsell_0.5.0 codetools_0.2-18 statmod_1.4.35
[10] withr_2.4.2 colorspace_2.0-0 rstudioapi_0.13
[13] ggsignif_0.6.0 MatrixGenerics_1.2.0 GenomeInfoDbData_1.2.4
[16] bit64_4.0.5 vctrs_0.3.6 generics_0.1.0
[19] metafor_3.0-2 ipred_0.9-11 xfun_0.20
[22] biovizBase_1.38.0 R6_2.5.0 bitops_1.0-6
[25] cachem_1.0.1 DelayedArray_0.16.0 assertthat_0.2.1
[28] promises_1.1.1 scales_1.1.1 nnet_7.3-15
[31] gtable_0.3.0 timeDate_3043.102 rlang_0.4.10
[34] splines_4.0.3 rtracklayer_1.50.0 rstatix_0.6.0
[37] lazyeval_0.2.2 ModelMetrics_1.2.2.2 dichromat_2.0-0
[40] broom_0.7.3 checkmate_2.0.0 BiocManager_1.30.10
[43] yaml_2.2.1 reshape2_1.4.4 abind_1.4-5
[46] modelr_0.1.8 backports_1.2.1 httpuv_1.5.5
[49] Hmisc_4.5-0 tools_4.0.3 lava_1.6.9
[52] ellipsis_0.3.1 RColorBrewer_1.1-2 Rcpp_1.0.6
[55] plyr_1.8.6 base64enc_0.1-3 progress_1.2.2
[58] zlibbioc_1.36.0 RCurl_1.98-1.2 prettyunits_1.1.1
[61] openssl_1.4.3 cowplot_1.1.1 SummarizedExperiment_1.20.0
[64] haven_2.3.1 cluster_2.1.1 fs_1.5.0
[67] magrittr_2.0.1 data.table_1.13.6 openxlsx_4.2.3
[70] reprex_0.3.0 grImport_0.9-3 ProtGenerics_1.22.0
[73] evaluate_0.14 hms_0.5.3 mime_0.9
[76] xtable_1.8-4 XML_3.99-0.5 rio_0.5.16
[79] jpeg_0.1-8.1 gridExtra_2.3 compiler_4.0.3
[82] crayon_1.3.4 minqa_1.2.4 htmltools_0.5.1.1
[85] later_1.1.0.1 Formula_1.2-4 lubridate_1.7.9.2
[88] DBI_1.1.0 MASS_7.3-53 rappdirs_0.3.1
[91] boot_1.3-26 Matrix_1.3-2 cli_3.0.0
[94] Gviz_1.34.0 gower_0.2.2 pkgconfig_2.0.3
[97] GenomicAlignments_1.26.0 foreign_0.8-81 recipes_0.1.15
[100] xml2_1.3.2 InteractionSet_1.18.0 foreach_1.5.1
[103] XVector_0.30.0 CompQuadForm_1.4.3 prodlim_2019.11.13
[106] rvest_0.3.6 VariantAnnotation_1.36.0 digest_0.6.27
[109] graph_1.68.0 Biostrings_2.58.0 rmarkdown_2.6
[112] cellranger_1.1.0 htmlTable_2.1.0 curl_4.3
[115] shiny_1.6.0 Rsamtools_2.6.0 nloptr_1.2.2.2
[118] lifecycle_1.0.0 nlme_3.1-151 jsonlite_1.7.2
[121] askpass_1.1 BSgenome_1.58.0 pillar_1.4.7
[124] fastmap_1.1.0 httr_1.4.2 plotrix_3.8-1
[127] survival_3.2-7 interactiveDisplayBase_1.28.0 glue_1.4.2
[130] zip_2.1.1 png_0.1-7 iterators_1.0.13
[133] BiocVersion_3.12.0 bit_4.0.4 Rgraphviz_2.34.0
[136] class_7.3-18 stringi_1.5.3 blob_1.2.1
[139] latticeExtra_0.6-29 memoise_2.0.0 mathjaxr_1.4-0