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Issues list

Nanosim hangs in the middle bug help wanted question
#184 opened Feb 17, 2023 by aastha-batta
18
Simulation stops and hangs bug enhancement
#112 opened Mar 23, 2021 by molleraj
17
NanoSim installation failure help wanted
#162 opened Apr 14, 2022 by cjwoodruff50
13
Whether NanoSim could generate Nanopore reads by simulation enhancement help wanted
#87 opened Jun 18, 2020 by Jingquan-Li
12
Transcript ID in reference and expression profile do not match bug
#237 opened Oct 30, 2024 by SimonHegele
8
Models for newer versions of Guppy with sup basecalls feature request
#198 opened Oct 6, 2023 by hasindu2008
7
ValueError: Found array with 0 sample(s) (shape=(0, 1)) while a minimum of 1 is required.
#190 opened May 16, 2023 by Dr-bioinfo
6
KeyError: "tag 'MD' not present"
#225 opened Sep 25, 2024 by mochew
5
Stuck at the simulation step bug
#210 opened Jul 10, 2024 by HLHsieh
5
head_vs_ht_ratio = head_vs_ht_ratio_list[each_read] IndexError: list index out of range
#228 opened Sep 29, 2024 by huangxin0221
4
IndexError: list index out of range bug question
#202 opened Feb 16, 2024 by weishwu
4
Stuck at simulation stage bug
#193 opened May 31, 2023 by kainth-amoldeep
4
Ability to change error rate
#111 opened Mar 17, 2021 by DafniG
4
Multithreading bug when using log-normal sampling help wanted question
#164 opened Apr 18, 2022 by 2tony2
3
reads did not aligned to 3' end
#101 opened Oct 12, 2020 by yhg926
3
Option to specify desired read coverage or sequencing depth feature request question
#188 opened Mar 31, 2023 by HLHsieh
2
Infinite loop in function extract_reads in metagenome mode when length equals max length bug enhancement
#185 opened Feb 24, 2023 by danpal96
2
Index out of range errors help wanted question
#166 opened Apr 21, 2022 by RagnarGrootKoerkamp
2
Output is not reproducible bug
#163 opened Apr 14, 2022 by baraaorabi
2
min_len and max_len options. bug feature request
#160 opened Apr 8, 2022 by XavierGrand
2
Metagenomic mode Help with read_analysis.py
#240 opened Nov 21, 2024 by florenmartino
1
Feature Request: Checking Input-files enhancement
#239 opened Nov 20, 2024 by SimonHegele
1
How many threads and memories required at training stage?
#236 opened Oct 20, 2024 by yaoxkkkkk
1
Questions about the usage and processing of the expression profile feature request
#207 opened Apr 18, 2024 by joyceFunk123
1
Options / suggestions for how to simulate nCats data? feature request
#200 opened Nov 29, 2023 by tfenne
1
ProTip! What’s not been updated in a month: updated:<2024-11-30.