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index.html
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---
layout: default
title: bedford lab
categories:
- home
---
<div class="row">
<div class="col-md-12">
<object class="pull-left biglogo" data="/images/logo.svg" type="image/svg+xml"></object>
<div class="bigtitle logobox">
bedford lab research
</div>
</div>
</div>
<div class="bigspacer"></div>
<div class="row">
<div class="col-md-12">
<div class="smallhead">
The Bedford Lab at the <a class="off" href="http://www.fredhutch.org/">Fred Hutch</a> works at the interface of evolution,
epidemiology and immunology. We apply computational and statistical methods to sequence data to understand viral dynamics,
looking at the geographic circulation of viral strains and their evolution. We are interested in linking mutations in the
virus to changes in acquired immunity in the human population, and then looking at how human immunity influences viral
transmission patterns.
</div>
</div>
</div>
<div class="hugespacer"></div>
<div class="row">
<div class="col-md-4">
<div class="head">
<a class="off" href="/blog/">Recent posts</a>
</div>
<div class="bigspacer"></div>
<div class="feedbox pad-left">
{% for post in site.categories.blog limit:8 %}
{% for member in site.categories.team %}
{% if member.title == post.author %}
{% assign author = member %}
{% endif %}
{% endfor %}
<div class="note">
<i class="fa fa-comment-o fa-fw"></i>
<a class="off" href="{{ post.url }}">
{{ post.title }}
</a>
</div>
<div class="smallspacer"></div>
<div class="smallnote">
Posted
{{ post.date | date_to_string }}
{% if author %}
by <a class="off" href="{{ author.url }}">{{ author.handle }}</a>
{% endif %}
</div>
<div class="spacer"></div>
<div class="spacer"></div>
{% endfor %}
</div>
<div class="bigspacer"></div>
</div>
<div class="col-md-4">
<div class="head">
<a class="off" href="/papers/">
Recent papers
</a>
</div>
<div class="bigspacer"></div>
<div class="feedbox pad-left">
{% for paper in site.categories.papers limit:8 %}
<div class="note">
<i class="fa fa-file-text-o fa-fw"></i>
<a class="off" href="{{ paper.url }}">
{{ paper.title }}
</a>
</div>
<div class="smallspacer"></div>
<div class="smallnote">
Posted
{{ paper.date | date_to_string }}
</div>
<div class="spacer"></div>
<div class="spacer"></div>
{% endfor %}
</div>
<div class="bigspacer"></div>
</div>
<div class="col-md-4">
<div class="head">
<a class="off" href="/projects/">Active projects</a>
</div>
<div class="bigspacer"></div>
<div class="feedbox pad-left">
{% for project in site.projects limit:8 %}
<div class="note">
<i class="fa fa-edit fa-fw"></i>
<a class="off" href="{{ project.url }}">
{{ project.title }} - {{ project.description }}
</a>
</div>
<div class="smallspacer"></div>
<div class="smallnote">
Updated
<a class="off" href="{{ project.commits.first.url }}">
{{ project.commits.first.date | date_to_string }}
</a>
by
<a class="off" href="{{ project.commits.first.author_url }}">
{{ project.commits.first.author_login }}
</a>
</div>
<div class="spacer"></div>
<div class="spacer"></div>
{% endfor %}
</div>
<div class="bigspacer"></div>
</div>
</div>
<div class="bigspacer"></div>
<div class="head">
Misc
</div>
<div class="spacer"></div>
<ul class="list-inline">
{% for page in site.categories.misc %}
<li class="footernav">
> <a class="off" href="{{ page.url }}">{{ page.title }}</a>
</li>
{% endfor %}
</ul>