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Commits on Oct 11, 2022

• Merge pull request stephenslab#173 from jdblischak/typo-remove-covariate

  Show description for 129ab81
  pcarbo

  authored
  129ab81

• Fix typo in example code to remove covariates

  jdblischak

  committed
  a2ed068

• A few updates to the vignettes.

  pcarbo

  committed
  fe85cc5

Commits on Sep 6, 2022

• Updated Matrix dependency.

  pcarbo

  committed
  c24fedd

Commits on Aug 22, 2022

• Fixed compute_colSds so that it does not generate a dense matrix when X is sparse.

  pcarbo

  committed
  4ad7052

• Fixed inefficient code for centering/scaling in set_X_attributes.

  pcarbo

  committed
  ff4f108

• Added a couple tests for compute_colSds.

  pcarbo

  committed
  84c7191

• Fixed sparse_susie_eval vignette.

  pcarbo

  committed
  495612e

• Reran devtools::document().

  pcarbo

  committed
  c1287a5

Commits on Aug 21, 2022

• Flagged a couple spots where computation is very inefficient when X is sparse.

  pcarbo

  committed
  e916af9

• Tests now pass with new version of Matrix.

  pcarbo

  committed
  72895f9

• Merge branch 'master' into fix-matrix-deprecations.

  pcarbo

  committed
  9560eea

Commits on Aug 19, 2022

• Made genlasso optional for trend_filtering vignette.

  pcarbo

  committed
  dcd0d09

Commits on Aug 17, 2022

• Removed genlasso dependency.

  pcarbo

  committed
  fc2bb15

Commits on Aug 15, 2022

• Set Matrix.warnDeprecatedCoerce = 2.

  pcarbo

  committed
  44e84b8

• Added Matrix (>= 1.4-2) dependency.

  pcarbo

  committed
  1952e15

• Added .onLoad call.

  pcarbo

  committed
  8fac04a

• Bumped up version.

  pcarbo

  committed
  2280c44

Commits on Jul 30, 2022

• Add column names to CS correlation summary

  gaow

  committed
  c39ab77

Commits on Jul 7, 2022

• Small change to susie_suff_stat to improve compatibility with earlier versions of the package.

  pcarbo

  committed
  f9a0033

Commits on Jun 27, 2022

• Small change to tests to address test failures in M1mac environment.

  pcarbo

  committed
  e4181f5

Commits on Jun 20, 2022

• Replaced a few \url's with \doi's.

  pcarbo

  committed
  1865411

• Fixed version of N2finemapping and N3finemapping data sets.

  pcarbo

  committed
  b39413b

Commits on Jun 15, 2022

• Fix example data dimension mismatch stephenslab#165

  gaow

  committed
  fa422e1

Commits on Jun 13, 2022

• Updated pkgdown site; revised finemapping_summary_statistics vignette.

  pcarbo

  committed
  4a63d85

• Revised warning message.

  pcarbo

  committed
  de19b1f

Commits on Jun 12, 2022

• Bumped up version.

  pcarbo

  committed
  80dc19c

• update warning message and vignettes

  zouyuxin

  committed
  58c83b6

Commits on Jun 10, 2022

• Fix a message prompt

  gaow

  committed
  61aefb2

Commits on May 13, 2022

• Fixed a test.

  pcarbo

  committed
  eb11bc0

• Added warning for when compute_univariate_zscore = TRUE.

  pcarbo

  committed
  85fc9fd

Commits on Apr 19, 2022

• Fix a unit test

  gaow

  committed
  71d61f7

• Replace some default warnings with the new warning message function

  gaow

  committed
  4e7f1a1

• Improve customized messages

  gaow

  committed
  6336932

Commits on Apr 12, 2022

• update vignettes

  zouyuxin

  committed
  9360ed6

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