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Commits on Mar 20, 2015

• updated gitignore(s) and removed more OS-auto-generated files from repository

  

  Christopher Jacobs

  authored and

  Christopher Jacobs

  committed
  9c5961d

• cleaned up lib/ and removed OS-auto-generated files from repository

  

  Christopher Jacobs

  authored and

  Christopher Jacobs

  committed
  cc2769a

Commits on Nov 19, 2014

• Fixed bug in 3D FBACell.

  dukovski

  committed
  eb2ce39

Commits on Aug 21, 2014

• Changed number of characters in image names. v2.2.1

  dukovski

  committed
  9cfb607

• Fixed a bug in FBAWorld.

  dukovski

  committed
  42482a9

Commits on Aug 20, 2014

• Add setting biomass to zero if negative and warnings.

  dukovski

  committed
  a46e20d

• Fixed dead cells bug in mutlithreaded case. FBAWorld and FBAWorld3D.

  dukovski

  committed
  382e717

Commits on Aug 19, 2014

• Fixed number of transport steps bug in 3D. v2.2.0

  dukovski

  committed
  a10092a

• Convection model in 2D and 3D. Also fixed bug with number of transport

  Show description for a3864db
  dukovski

  committed
  a3864db

Commits on Jun 3, 2014

• Added README and COPYING files.

  dukovski

  committed
  860e5df

Commits on Apr 8, 2014

• Fixed toolbar bug in Comets.loadLayoutFile.

  dukovski

  committed
  99878b7

Commits on Mar 13, 2014

• Fixed layout menu at start in CometsMenuBar.setMode and in

  Show description for 7717431
  dukovski

  committed
  7717431

• Fixed bug loading 3D layout file in Comets.loadLayoutFile,

  Show description for 676564f
  dukovski

  committed
  676564f

• Change in CometsMenuBar.

  dukovski

  committed
  d07aa35

• Changes in CometsMenuBar.

  dukovski

  committed
  07b7e49

• URL corrections in Comets.aboutDialog.

  dukovski

  committed
  bd80208

• Small change in FBACometsLoader in parseModelLine().

  dukovski

  committed
  0ee2e81

Commits on Mar 12, 2014

• Fixed a bug in Comets.loadModelFile.

  dukovski

  committed
  3ef107d

• Fixed bug with the manifest file in FBACometsLoader and FBAParameters.

  dukovski

  committed
  1b49c7b

Commits on Mar 11, 2014

• Added manifest file capability for 3D.

  dukovski

  committed
  02ed9d1

• Corrected version number and date.

  dukovski

  committed
  3ddccc1

• Added manifest file output.

  dukovski

  committed
  cd41289

• Add New Files

  dukovski

  committed
  176b5c2

• Release 2.0.1 Added GUROBI optimizer capability. Modified FBAModel and

  Show description for e3e7c23
  dukovski

  committed
  e3e7c23

Commits on Nov 13, 2013

• Added activation functionality. New activation features in Simulation

  Show description for 9a0eb95
  dukovski

  committed
  9a0eb95

• Fixed bug in FBAParameters, FBAWorld3D.run and

  Show description for 38d5775
  dukovski

  committed
  38d5775

• Fixed bug in CometsSetupPanel, CometsSetupPanel3D.render().

  dukovski

  committed
  4bb4c30

Commits on Nov 12, 2013

• Added refresh media functionality in FBACometsLoader in loadLayoutFile.

  dukovski

  committed
  fa1fe82

Commits on Nov 2, 2013

• Added 3D static media functionality in loadLayoutFile in

  Show description for 3037ab3
  dukovski

  committed
  3037ab3

Commits on Oct 26, 2013

• Fixed a bug in World3D.addStaticMediaSpace(StaticPoint).

  dukovski

  committed
  2b03b3f

Commits on Oct 4, 2013

• Included OBJECTIVE_STYLE as input in model files.

  dukovski

  committed
  51d9a19

Commits on Sep 15, 2013

• Changed number format in FBAWorld in writeMedia, writeBiomass, writeFlux

  Show description for 9d57d9e
  dukovski

  committed
  9d57d9e

Commits on Sep 14, 2013

• Corrected the lb in FBACell.run(models).

  dukovski

  committed
  08c933c

Commits on Sep 4, 2013

• Changed to scientific notation format in writeMedialog in FBAWorld and

  Show description for bc02a29
  dukovski

  committed
  bc02a29

Commits on Aug 1, 2013

• 3D functionality for edit model parameters panel.

  dukovski

  committed
  38165a2

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