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17 stars written in Shell
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Bring data to life with SVG, Canvas and HTML. πŸ“ŠπŸ“ˆπŸŽ‰

Shell 109,240 22,864 Updated Oct 22, 2024

An experimental alternative to the git-submodule command. Merges and splits subtrees from your project into subprojects and back.

Shell 1,370 124 Updated Jul 20, 2017

EasyBuild - building software with ease

Shell 472 145 Updated Dec 1, 2024

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

Shell 404 190 Updated Jul 28, 2023

Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).

Shell 81 18 Updated Jul 23, 2024

Helper scripts for biological data processing from Sentieon

Shell 64 21 Updated Oct 23, 2024

Base classes for Alien:: modules (deprecated, see Alien-Build)

Shell 35 19 Updated Sep 7, 2017

A tiny package manager for crucial unix and bioinformatics tools

Shell 27 10 Updated Apr 30, 2015

Ready-made Taxonomic Weights Repository

Shell 23 6 Updated Mar 31, 2022

Variant Calling Pipeline in Cromwell/WDL

Shell 21 4 Updated Feb 22, 2020

modENCODE Galaxy on Amazon Cloud

Shell 11 15 Updated Nov 13, 2014

Database Driver Interface for Perl 6 and Parrot

Shell 11 Updated Sep 17, 2010

H3A variant calling pipeline

Shell 5 8 Updated Sep 7, 2020

Illinois Mayo Taxonomy Operations for RNA Database Operations

Shell 3 2 Updated Jul 3, 2020

A tiny package manager for crucial unix and bioinformatics tools

Shell 2 Updated Nov 1, 2011

Given a file of marker locations in one genome, report the locations of those markers in a second genome.

Shell 1 Updated Nov 29, 2023