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Commits on Mar 13, 2023

• Migrate default branch to main (wfondrie#93)

  wfondrie

  authored
  58128c8

• ✨ Add rng args and migrate to the np.random.Generator API (wfondrie#91)

  Show description for 3b5191b
  

  sjust-seerbio

  and

  wfondrie

  authored
  3b5191b

Commits on Dec 14, 2022

• Merge branch 'master' of github.com:wfondrie/mokapot

  wfondrie

  committed
  46fc032

• Bump changelog for release

  wfondrie

  committed
  ab1f5b7

• changed metadata import to allow the groups arg (wfondrie#86)

  Show description for ad23d1d
  jspaezp

  authored
  ad23d1d

Commits on Dec 3, 2022

• Reorder release notes

  wfondrie

  committed
  f2eea1d

• Bump CHANGELOG

  wfondrie

  committed
  6fc341e

• Feature/plugin arch (wfondrie#75)

  Show description for 61ecbd4
  

  jspaezp

  and

  wfondrie

  authored
  61ecbd4

Commits on Nov 9, 2022

• Update workflows to use 3.10

  wfondrie

  committed
  bf6c0cd

• Add scipy to the Docker image. (wfondrie#82)

  wfondrie

  authored
  66ed541

Commits on Oct 28, 2022

• Add procps to the docker image (wfondrie#81)

  wfondrie

  authored
  4fd1228

Commits on Oct 25, 2022

• Fix Docker workflow (wfondrie#80)

  Show description for e0b3d60
  wfondrie

  authored
  e0b3d60

• Add a custom Docker image (wfondrie#79)

  Show description for 9bcdef4
  wfondrie

  authored
  9bcdef4

• migration to pyproject toml (wfondrie#77)

  jspaezp

  authored
  de93090

• Make Confidence objects picklable. (wfondrie#78)

  Show description for 432ab83
  wfondrie

  authored
  432ab83

Commits on Jul 20, 2022

• Fixed grouped scores and added test (wfondrie#65)

  Show description for 10559e4
  wfondrie

  authored
  10559e4

Commits on Jul 18, 2022

• Fixed need for intercept (wfondrie#62)

  Show description for 21680cc
  wfondrie

  authored
  21680cc

• Fix missing values caused by logging (wfondrie#60)

  Show description for 3a638c0
  wfondrie

  authored
  3a638c0

Commits on Jun 30, 2022

• Docstring fix (wfondrie#59)

  Show description for bca014d
  

  surya-money

  and

  wfondrie

  authored
  bca014d

Commits on Jun 24, 2022

• Change CLI argument and minor style changes (wfondrie#58)

  wfondrie

  authored
  0dd10e2

Commits on Jun 23, 2022

• fix non-deterministic multi-threading and reproduce results using trained models (wfondrie#52)

  sambenfredj

  authored
  a5da73b

Commits on Jun 22, 2022

• Added .idea files to .gitignore and tweaked docstring in model.py (wfondrie#53)

  Show description for d82641b
  surya-money

  authored
  d82641b

Commits on Apr 29, 2022

• Update the documentation (wfondrie#51)

  wfondrie

  authored
  91e6f96

Commits on Apr 15, 2022

• Enforce min_length with clip_nterm_methionine=True (wfondrie#49)

  Show description for b411102
  wfondrie

  authored
  b411102

Commits on Apr 1, 2022

• Corrected the mentioning of FlashLFQ (wfondrie#48)

  tkschmidt

  authored
  31a5851

Commits on Mar 11, 2022

• Prepare release v0.8.0 (wfondrie#45)

  wfondrie

  authored
  8ef79af

Commits on Mar 9, 2022

• Improve runtime (wfondrie#44)

  Show description for 1c76a7e
  

  3 peopleauthored
  1c76a7e

Commits on Nov 16, 2021

• Fix typo in open_modification_bin_size help text (wfondrie#41)

  mobiusklein

  authored
  bed4946

Commits on Sep 3, 2021

• added support for subset > data size (wfondrie#40)

  Show description for 5148da1
  

  wfondrie

  and

  jspaezp

  authored
  5148da1

Commits on Jul 20, 2021

• Updated changelog

  wfondrie

  committed
  4f76a56

• Merge pull request wfondrie#36 from jspaezp/bugfix-aggregate-keep-decoys

  Show description for 2f794b4
  wfondrie

  authored
  2f794b4

• merge

  jspaezp

  committed
  7b031da

• added tests for decoy file in conjunction to --aggregate

  jspaezp

  committed
  0542a5f

• added tests for decoy file in conjunction to --aggregate

  jspaezp

  committed
  f83462b

Commits on Jul 18, 2021

• fixed bug where aggregating ignored --keep_decoys flag

  jspaezp

  committed
  d69167f

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