Unix, R and python tools for genomics and data science

AlphaFold2 non-docker setup

[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome

SEACR: Sparse Enrichment Analysis for CUT&RUN

A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to a CpG count matrix (Bismark cytosine reports)

An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq

📝 Easily create a beautiful website using Academic, Hugo, and Netlify