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juicebox.js

juicebox.js is an embeddable interactive contact map viewer for .hic files written in JavaScript and CSS. It is based on the desktop Juicebox visualization application.

A public instance can be found at http://aidenlab.org/juicebox.

User documentation can be found here.

Instructions for embedding a juicebox.js instance in a web page can be found here.

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HiC contact matrix visualization

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  • JavaScript 68.3%
  • CSS 19.6%
  • HTML 12.1%