hominids.Rd

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/datasets.R
\docType{data}
\name{hominids}
\alias{hominids}
\title{A BPP A00 MCMC sample for an hominid phylogeny}
\format{
\code{hominids} is a list with elements \code{mcmc}, a dataframe with
  20,000 rows and 8 columns, and \code{tree}, an object of class
  \code{phylo} from the \code{ape} package.

  \code{mcmc} is a posterior sample from a BPP A00 MCMC analysis containing
  the relative divergence times (tau's) and nucleotide diversities (theta's)
  for the four species ape (hominid) phylogeny.

  \code{tree} contains the phylogeny with node ages given as the posterior
  means of the tau's in \code{mcmc}.
}
\source{
K. Angelis and M. dos Reis (2015) \emph{The impact of ancestral
  population size and incomplete lineage sorting on Bayesian estimation of
  species divergence times.} Curr. Zool., 61: 874--885.
}
\usage{
hominids
}
\description{
This dataset contains the results from the BPP A00 analysis of
  hominid evolution from Angelis and dos Reis (2015).
}
\seealso{
\code{\link{microcebus}}
}
\keyword{datasets}