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enzymes.xml
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enzymes.xml
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<?xml version="1.0" encoding="utf-8" ?>
<mspyEnzymes version="1.0">
<enzyme name="Arg-C">
<expression><![CDATA[[R][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Asp-N">
<expression><![CDATA[[A-Z][D]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="1" after="0" />
</enzyme>
<enzyme name="Bromelain">
<expression><![CDATA[[KAY][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="CNBr-HSerLac">
<expression><![CDATA[[M][A-Z]]]></expression>
<formula nTerm="H" cTerm="O-1C-1H-3" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Cathepsin B">
<expression><![CDATA[[R][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Cathepsin D">
<expression><![CDATA[[LF][^VAG]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Cathepsin G">
<expression><![CDATA[[YWF][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Chymotrypsin">
<expression><![CDATA[[YWFL][^P]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Clostripain">
<expression><![CDATA[[R][^P]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Elastase">
<expression><![CDATA[[AVLIGS][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Glu-C Bic">
<expression><![CDATA[[E][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Glu-C Phos">
<expression><![CDATA[[ED][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Hydroxylamine">
<expression><![CDATA[[N][G]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="0" />
</enzyme>
<enzyme name="Lys-C">
<expression><![CDATA[[K][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Lys-N">
<expression><![CDATA[[A-Z][K]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="1" after="0" />
</enzyme>
<enzyme name="Non-Specific">
<expression><![CDATA[[A-Z][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="1" after="1" />
</enzyme>
<enzyme name="Papain">
<expression><![CDATA[[RK][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Pepsin">
<expression><![CDATA[[LF][^VAG]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Proteinase K">
<expression><![CDATA[[YWF][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Subtilisin">
<expression><![CDATA[[^RHK][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Thermolysin">
<expression><![CDATA[[A-Z][LFIVMA]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="1" after="0" />
</enzyme>
<enzyme name="TrypAspN">
<expression><![CDATA[(([KR][^P])|([A-Z][D]))]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="0" />
</enzyme>
<enzyme name="TrypChymo">
<expression><![CDATA[[FYWLKR][^P]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Trypsin">
<expression><![CDATA[[KR][^P]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
<enzyme name="Trypsin/P">
<expression><![CDATA[[KR][A-Z]]]></expression>
<formula nTerm="H" cTerm="OH" />
<allowMods before="0" after="1" />
</enzyme>
</mspyEnzymes>