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为GPT/GLM等LLM大语言模型提供实用化交互接口，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, m…
An LLM-powered knowledge curation system that researches a topic and generates a full-length report with citations.
LLM based autonomous agent that conducts deep local and web research on any topic and generates a long report with citations.
High accuracy RAG for answering questions from scientific documents with citations
Python package for AutoML on Tabular Data with Feature Engineering, Hyper-Parameters Tuning, Explanations and Automatic Documentation
Python library to facilitate genome assembly, annotation, and comparative genomics
"Your Fully-Automated Personal AI Assistant, and Open-Source & Cost-Efficient Alternative to OpenAI's Deep Research"
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
An analysis and visualization platform for 'omics data
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
Package for fetching metadata and downloading data from SRA/ENA/GEO
A genome visualization python package for comparative genomics
Download FASTQ files from SRA or ENA repositories.
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
An updated pipeline for pangenome investigation
Build a partitioned pangenome graph from microbial genomes
a thin wrapper of chatgpt for improving paper writing.
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Antimicrobial Resistance Identification By Assembly
Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure
A variational framework for inferring population structure from SNP genotype data.
MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies
A system for automating the design of predictive modeling pipelines tailored for clinical prognosis.
Short Read Sequence Typing for Bacterial Pathogens