- Discuss usage on Discourse and development on GitHub.
- Get started by browsing :doc:`tutorials <tutorials>`, :doc:`usage principles <usage-principles>` or the main :doc:`API <api/index>`.
- If Scanpy is useful for your research, consider citing Genome Biology (2018).
- Follow changes in the :doc:`release notes <release-notes>`.
- Find tools that harmonize well with anndata & Scanpy via the :doc:`external API <external/index>` and the :doc:`ecosystem page <ecosystem>`.
Scanpy has been selected an essential open source software for science by CZI among 32 projects, along with giants such as Scipy, Numpy, Pandas, Matplotlib, scikit-learn, scikit-image/plotly, pip, jupyterhub/binder, Bioconda, Seurat, Bioconductor, and others.
.. toctree:: :maxdepth: 1 :hidden: tutorials usage-principles installation api/index external/index ecosystem release-notes references