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Commits on May 21, 2020

• Ignore RandomState references so rtd will build docs

  ivirshup

  committed
  5bc37a2

• Add docfix for pca

  ivirshup

  committed
  ec3a44f

• Note fix in changelog

  ivirshup

  committed
  79ea5d0

• Format test_pca.py

  ivirshup

  committed
  9811a08

• Make sure random seed has an effect for pca

  ivirshup

  committed
  535c102

Commits on May 18, 2020

• Update release notes (scverse#1218)

  Show description for 6c04c9e
  

  3 peopleauthored
  6c04c9e

• Update install instructions to use leiden

  ivirshup

  committed
  2dedd98

• formatting

  ivirshup

  committed
  1f1b4d5

Commits on May 14, 2020

• Format combat

  ivirshup

  committed
  e1cd0d8

• Allow combat to work when obs_names are not unique

  ivirshup

  committed
  a668296

• Fix future warning for neighbors in tests

  ivirshup

  committed
  8e999a9

• Fix neighbors-based FutureWarnings for sc.datasets

  ivirshup

  committed
  058de9b

• Added tests for warnings from datasets

  ivirshup

  committed
  d51c858

• Whitespace

  ivirshup

  committed
  cbb3ade

Commits on May 6, 2020

• Bugfix scale centering (scverse#1200)

  Show description for 0a6bf5a
  

  ivirshup

  and

  simonwm

  authored
  0a6bf5a

Commits on May 4, 2020

• Fix for louvain 0.7+ compat

  ivirshup

  committed
  8fcc4da

Commits on May 1, 2020

• Make normalize_total actualize views

  ivirshup

  committed
  127c8b2

• Exclude bugged louvain release

  ivirshup

  committed
  7c65221

• Workaround for docs and tab completion

  ivirshup

  committed
  65c10b5

• Make docs pretty

  Show description for 6a50cba
  ivirshup

  committed
  6a50cba

• Reformatted log1p and made tests more generic

  ivirshup

  committed
  5ae4907

• Make sc.pp.scale more flexible

  Show description for a5e0a47
  ivirshup

  committed
  a5e0a47

• Added getter/ setter methods for X

  ivirshup

  committed
  26acd4a

Commits on Apr 17, 2020

• Fix ebi downloads

  ivirshup

  committed
  4156314

Commits on Apr 15, 2020

• Added release note for sparse-pca

  ivirshup

  committed
  f6a49e8

• Minor style fixes.

  ivirshup

  committed
  23c09bc

• Clean up pca code

  Show description for d8816fd
  ivirshup

  committed
  d8816fd

Commits on Apr 3, 2020

• Fix visium_docs

  ivirshup

  committed
  b8dcb6d

Commits on Mar 15, 2020

• Fix and test for visium reading bug.

  Show description for 51dc038
  ivirshup

  committed
  51dc038

• Clean up sc.datasets tab completion

  Show description for b9351f2
  ivirshup

  committed
  b9351f2

• Bump mpl requirement, ref scverse#1098

  ivirshup

  committed
  daef23c

• Fix wishbone plotting reference

  ivirshup

  committed
  fc6bcc7

Commits on Mar 11, 2020

• Fix reading of non gene expression data from 10x h5 files

  Show description for 8d26ad5
  ivirshup

  committed
  8d26ad5

• Test that loading an example visium dataset doesn't change results from another

  ivirshup

  committed
  f963a7a

• Update paths for test data

  ivirshup

  committed
  dfc47d7

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