Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fmriprep_ciftify BIDS-App does not start #143

Open
StephDocTUM opened this issue Nov 27, 2020 · 0 comments
Open

fmriprep_ciftify BIDS-App does not start #143

StephDocTUM opened this issue Nov 27, 2020 · 0 comments

Comments

@StephDocTUM
Copy link

Hi,

running:
docker run -ti --rm -v /home/neurolab2/Schreibtisch/Stephan/Programmes/freesurfer/license.txt:/fslicense.txt:ro -v /home/neurolab2/Schreibtisch/Drmed/final_GSP:/data:ro -v /home/neurolab2/Schreibtisch/Drmed/final_ciftify_GSP:/out tigrlab/fmriprep_ciftify:latest /data /out/out participant --participant_label=1 --read-from-derivatives /home/neurolab2/Schreibtisch/Drmed/final_GSP/derivatives --resample-to-T1w32k --anat_only --fs-license /fslicense.txt --n_cpus 4

creates the output folder, but does not continue to produce any output. No errors are shown in the terminal and it is running forever.
Any ideas?

Best,

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant