Commits

Branch selector

 3ce3102

User selector

All users

Datepicker

All time

Commit History

Commits on Nov 29, 2018

• added ImmunoOncology to biocViews upon request email

  demuellae

  committed
  3ce3102

  Copy full SHA for 3ce3102

Commits on Nov 6, 2018

• Merge branch 'feature/RnBeads2.0' of https://github.com/epigen/RnBeads into feature/RnBeads2.0

  lutsik

  committed
  c9c87f4

  Copy full SHA for c9c87f4

• debugging intensities.by.color

  lutsik

  committed
  d07ecd7

  Copy full SHA for d07ecd7

Commits on Nov 3, 2018

• doc updates: Pavlos doc updates built as Rd + Roxigen update

  demuellae

  committed
  5cfe74b

  Copy full SHA for 5cfe74b

Commits on Nov 2, 2018

• Merge branch 'master' into feature/RnBeads2.0

  demuellae

  committed
  0077454

  Copy full SHA for 0077454

Commits on Oct 30, 2018

• bump x.y.z versions to odd y after creation of RELEASE_3_8 branch

  vobencha

  committed
  b13b4f9

  Copy full SHA for b13b4f9

• bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch

  vobencha

  committed
  dc3df15

  Copy full SHA for dc3df15

Commits on Oct 29, 2018

• updated the method documentation of estimateProportionsCP

  lutsik

  committed
  e5b963f

  Copy full SHA for e5b963f

• updated the documentation of combine()

  lutsik

  committed
  f405c5e

  Copy full SHA for f405c5e

Commits on Oct 23, 2018

• bumped version to 1.99 (for 2.0 release)

  demuellae

  committed
  47baba4

  Copy full SHA for 47baba4

• Bumped version and updated news

  demuellae

  committed
  2d5378f

  Copy full SHA for 2d5378f

Commits on Oct 22, 2018

• Removed non ASCII character in differentialMethylation.R

  schmic05

  committed
  9fefce5

  Copy full SHA for 9fefce5

Commits on Oct 19, 2018

• Deactivated intersample plots for BS sets and Added section for CNV estimation in the vignette

  schmic05

  committed
  9f176b4

  Copy full SHA for 9f176b4

Commits on Oct 17, 2018

• bugfix for import.bed.style not changing when using the DJ

  demuellae

  committed
  cd84e8b

  Copy full SHA for cd84e8b

Commits on Oct 16, 2018

• vignette changes for upper case for rnb.set.annotation

  demuellae

  committed
  70ec392

  Copy full SHA for 70ec392

• doc update

  demuellae

  committed
  22e3fa5

  Copy full SHA for 22e3fa5

• changed the Column names for rnb.set.annotation to upper case

  demuellae

  committed
  7146ae2

  Copy full SHA for 7146ae2

Commits on Oct 5, 2018

• Fixed inconsistency in documentation

  schmic05

  committed
  089ef22

  Copy full SHA for 089ef22

• Fixed bug in SVA plot reported by user

  schmic05

  committed
  2b7d92e

  Copy full SHA for 2b7d92e

Commits on Oct 2, 2018

• Fixed bug in imputation

  schmic05

  committed
  ca75d8d

  Copy full SHA for ca75d8d

Commits on Sep 26, 2018

• DJ: added filtering.whitelist and blacklist options

  demuellae

  committed
  602075d

  Copy full SHA for 602075d

• fixed an issue for handling RnBDiffMeth objects with no regions

  demuellae

  committed
  1039a07

  Copy full SHA for 1039a07

• added GOstats reference to RnBeads reports

  demuellae

  committed
  0aaeb21

  Copy full SHA for 0aaeb21

Commits on Sep 25, 2018

• Set a reference to Pidsley et al. 2016 to the Preprocessing report when filtering cross-reactive probes.

  yxomo

  committed
  15b78db

  Copy full SHA for 15b78db

• Added one sentence to the description of the LUMP values in the report on Covariate Inference.

  yxomo

  committed
  815706e

  Copy full SHA for 815706e

Commits on Sep 24, 2018

• more tooltips in RnBeadsDJ

  demuellae

  committed
  5fc1ba1

  Copy full SHA for 5fc1ba1

Commits on Sep 23, 2018

• RnBeadsDJ: tooltips for tabs and parameter selection elements

  demuellae

  committed
  7eb5e96

  Copy full SHA for 7eb5e96

Commits on Sep 22, 2018

• Fix reviewer comment: number of cores now only gets set when (parts of) the analysis is run

  demuellae

  committed
  343d862

  Copy full SHA for 343d862

Commits on Sep 12, 2018

• Merge branch 'feature/RnBeads2.0' of github.com:epigen/RnBeads into feature/RnBeads2.0

  schmic05

  committed
  6866488

  Copy full SHA for 6866488

• Updated NEWS

  schmic05

  committed
  c703c2e

  Copy full SHA for c703c2e

• Changes all occurences of 'gender' to the more neutral word 'sex'

  schmic05

  committed
  3c6845d

  Copy full SHA for 3c6845d

Commits on Aug 30, 2018

• replace BiocInstaller biocLite mentions with BiocManager

  LiNk-NY

  committed
  c0765d7

  Copy full SHA for c0765d7

Commits on Aug 1, 2018

• Merge branch 'feature/RnBeads2.0' of github.com:epigen/RnBeads into feature/RnBeads2.0

  schmic05

  committed
  54173f6

  Copy full SHA for 54173f6

• Updated news and version bump

  schmic05

  committed
  2986df2

  Copy full SHA for 2986df2

• Fixed rnb.region.types if an object names mm10, hg19, etc. is present in the environment

  Show description for c9dec9a
  schmic05

  committed
  c9dec9a

  Copy full SHA for c9dec9a

Pagination

Previous

Next