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Randomly subsample sequencing reads or alignments
HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of >= 10 kbps is recommended).
👷 Fasten toolkit, for streaming operations on fastq files
a tool to filter sites in a FASTA-format whole-genome pseudo-alignment
Extract subsets of ONT (Nanopore) reads based on time
Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing library they are read from. It is intended to differentiate betwe…