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Commits on Jul 4, 2024

• Merge branch 'master' of github.com:fredericlemoine/gotree

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Commits on Apr 29, 2024

• Merge pull request #24 from krtab/shebang

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• Use a shebang to enforce running test.sh in bash

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  krtab

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• Merge pull request #23 from lucblassel/trailing_whitespace

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Commits on Apr 28, 2024

• Specifying bash as test.sh language

  lucblassel

  committed
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• Fixing newick parsing to accepts trailing whitespace after semicolon

  lucblassel

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Commits on Feb 26, 2024

• Added options min-len and max-len to gotree brlen setrand

  fredericlemoine

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Commits on Feb 8, 2024

• Corrected equal min dist branches in transfer index

  fredericlemoine

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• Added --terminal option to comment comment clear

  fredericlemoine

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Commits on Jan 23, 2024

• Updated README

  fredericlemoine

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Commits on Jan 18, 2024

• Updated go to 1.21.6

  fredericlemoine

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Commits on Jan 16, 2024

• Added missing file for option --eems

  fredericlemoine

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Commits on Jan 15, 2024

• Corrected output of compute mutations --eem

  fredericlemoine

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• Added option --eems to goalign compute mutations

  fredericlemoine

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Commits on Dec 19, 2023

• Added option --avg to gotree matrix

  fredericlemoine

  committed
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Commits on Nov 30, 2023

• gotree ltt takes node dates from the tree if present, otherwise in mutations

  fredericlemoine

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• Remove debug

  fredericlemoine

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Commits on Nov 29, 2023

• Corrected gotree brlen add parameter name

  fredericlemoine

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• Added gotree brlen add command

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Commits on Nov 28, 2023

• Added ltt test

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• Updated README

  fredericlemoine

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• Updated doc for gotree ltt

  fredericlemoine

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  6d8d378

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• Corrected ltt plot

  fredericlemoine

  committed
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• Added command gotree ltt : write lineage through time data, and draw plot

  fredericlemoine

  committed
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Commits on Nov 21, 2023

• Deduplicated same x lab points in gotree ltt

  fredericlemoine

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• Added ltt command

  fredericlemoine

  committed
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Commits on Nov 13, 2023

• Updated gotree collapse name doc

  fredericlemoine

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Commits on Nov 12, 2023

• Merge branch 'master' into dev

  fredericlemoine

  committed
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• Added command : gotree collapse name

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  committed
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Commits on Oct 4, 2023

• Reverted support for quotes in comments, because of pb with quotes in tip names #9

  fredericlemoine

  committed
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Commits on Sep 14, 2023

• Updated newick parser to allow ';' in comments

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  committed
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Commits on Sep 13, 2023

• Updated parser to take into account comments enclosed within single quotes

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  committed
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Commits on Sep 6, 2023

• Added command : gotree extract mutations

  fredericlemoine

  committed
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Commits on May 31, 2023

• Updated doc

  fredericlemoine

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• Updated +golang.org/x/sys

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