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welcome.html
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<html>
<head>
<meta charset="utf-8">
<title>The NeuroLINCS Galaxy</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<link rel="stylesheet" type="text/css" href="//fonts.googleapis.com/css?family=Merriweather:300,700,700italic,300italic|Open+Sans:700,400">
<style type="text/css">
html { font-family: sans-serif; -ms-text-size-adjust: 100%; -webkit-text-size-adjust: 100%}body { margin: 0; }article, aside, details,figcaption, figure,footer, header,main, menu, nav,section, summary { display:block; }audio, canvas, progress, video { display: inline-block; vertical-align: baseline;}audio:not([controls]) { display: none; height: 0; }[hidden], template { display: none; }a { background-color: transparent;}a:active, a:hover { outline: 0; }abbr[title] { border-bottom: 1px dotted; }b, strong { font-weight: bold; }dfn { font-style: italic; }h1 { font-size: 2em; margin: 0.67em 0; }mark { background: #ff0; color: #000; }small { font-size: 80%; }sub, sup { font-size: 75%; line-height: 0; position: relative; vertical-align: baseline;}sup { top: -0.5em; }sub { bottom: -0.25em; }img { border: 0; }svg:not(:root) { overflow: hidden; }figure { margin: 1em 40px; }hr { box-sizing: content-box; height: 0; }pre { overflow: auto; }code, kbd, pre, samp { font-family: monospace, monospace; font-size: 1em; }button, input, optgroup, select, textarea { color: inherit; font: inherit; margin: 0;}button { overflow: visible; }button, select { text-transform: none; }button, html input[type="button"],input[type="reset"], input[type="submit"] { -webkit-appearance: button; cursor: pointer;}button[disabled], html input[disabled] { cursor: default; }button::-moz-focus-inner, input::-moz-focus-inner { border: 0; padding: 0; }input { line-height: normal; }input[type="checkbox"],input[type="radio"] { box-sizing: border-box; padding: 0; }input[type="number"]::-webkit-inner-spin-button,input[type="number"]::-webkit-outer-spin-button { height: auto; }input[type="search"] { -webkit-appearance: textfield; }input[type="search"]::-webkit-search-cancel-button,input[type="search"]::-webkit-search-decoration { -webkit-appearance: none; }fieldset { border: 1px solid #c0c0c0; margin: 0 2px; padding: 0.35em 0.625em 0.75em;}legend { border: 0; padding: 0; }textarea { overflow: auto; }optgroup { font-weight: bold; }table{ border-collapse: collapse; border-spacing: 0; }td, th{ padding: 0; }/* ========================================================================== 1. Icons - Sets up the icon font and respective classes ========================================================================== *//* Import the font file with the icons in it */@font-face { font-family: "casper-icons"; src:url("../fonts/casper-icons.eot?v=1"); src:url("../fonts/casper-icons.eot?v=1#iefix") format("embedded-opentype"), url("../fonts/casper-icons.woff?v=1") format("woff"), url("../fonts/casper-icons.ttf?v=1") format("truetype"), url("../fonts/casper-icons.svg?v=1#icons") format("svg"); font-weight: normal; font-style: normal;}/* Apply these base styles to all icons */[class^="icon-"]:before, [class*=" icon-"]:before { font-family: "casper-icons", "Open Sans", sans-serif; speak: none; font-style: normal; font-weight: normal; font-variant: normal; text-transform: none; line-height: 1; text-decoration: none !important; -webkit-font-smoothing: antialiased; -moz-osx-font-smoothing: grayscale;}/* Each icon is created by inserting the correct character into the content of the :before pseudo element. Like a boss. */.icon-ghost:before { content: "\f600";}.icon-feed:before { content: "\f601";}.icon-twitter:before { content: "\f602"; font-size: 1.1em;}.icon-google-plus:before { content: "\f603";}.icon-facebook:before { content: "\f604";}.icon-arrow-left:before { content: "\f605";}.icon-stats:before { content: "\f606";}.icon-location:before { content: "\f607"; margin-left: -3px; /* Tracking fix */}.icon-link:before { content: "\f608";}.icon-menu:before { content: "\f609";}/* IMPORTANT: When making any changes to the icon font, be sure to increment the version number by 1 in the @font-face rule. `?v=1` becomes `?v=2` This forces browsers to download the new font file.*//* ========================================================================== 2. General - Setting up some base styles ========================================================================== */html { height: 100%; max-height: 100%; font-size: 62.5%; -webkit-tap-highlight-color: rgba(0, 0, 0, 0);}body { height: 100%; max-height: 100%; font-family: "Merriweather", serif; letter-spacing: 0.01rem; font-size: 1.8rem; line-height: 1.75em; color: #3A4145; -webkit-font-feature-settings: 'kern' 1; -moz-font-feature-settings: 'kern' 1; -o-font-feature-settings: 'kern' 1; text-rendering: geometricPrecision;}::-moz-selection { background: #D6EDFF;}::selection { background: #D6EDFF;}h1, h2, h3,h4, h5, h6 { -webkit-font-feature-settings: 'dlig' 1, 'liga' 1, 'lnum' 1, 'kern' 1; -moz-font-feature-settings: 'dlig' 1, 'liga' 1, 'lnum' 1, 'kern' 1; -o-font-feature-settings: 'dlig' 1, 'liga' 1, 'lnum' 1, 'kern' 1; color: #2E2E2E; line-height: 1.15em; margin: 0 0 0.4em 0; font-family: "Open Sans", sans-serif; text-rendering: geometricPrecision;}h1 { font-size: 5rem; letter-spacing: -2px; text-indent: -3px;}h2 { font-size: 3.6rem; letter-spacing: -1px;}h3 { font-size: 3rem; letter-spacing: -0.6px;}h4 { font-size: 2.5rem;}h5 { font-size: 2rem;}h6 { font-size: 2rem;}a { color: #4A4A4A; transition: color 0.3s ease;}a:hover { color: #111;}p, ul, ol, dl { -webkit-font-feature-settings: 'liga' 1, 'onum' 1, 'kern' 1; -moz-font-feature-settings: 'liga' 1, 'onum' 1, 'kern' 1; -o-font-feature-settings: 'liga' 1, 'onum' 1, 'kern' 1; margin: 0 0 1.75em 0; text-rendering: geometricPrecision;}ol, ul { padding-left: 3rem;}ol ol, ul ul,ul ol, ol ul { margin: 0 0 0.4em 0; padding-left: 2em;}dl dt { float: left; width: 180px; overflow: hidden; clear: left; text-align: right; text-overflow: ellipsis; white-space: nowrap; font-weight: 700; margin-bottom: 1em;}dl dd { margin-left: 200px; margin-bottom: 1em}li { margin: 0.4em 0;}li li { margin: 0;}hr { display: block; height: 1px; border: 0; border-top: #EFEFEF 1px solid; margin: 3.2em 0; padding: 0;}blockquote { -moz-box-sizing: border-box; box-sizing: border-box; margin: 1.75em 0 1.75em -2.2em; padding: 0 0 0 1.75em; border-left: #4A4A4A 0.4em solid;}blockquote p { margin: 0.8em 0; font-style: italic;}blockquote small { display: inline-block; margin: 0.8em 0 0.8em 1.5em; font-size: 0.9em; color: #CCC;}blockquote small:before { content: "\2014 \00A0"; }blockquote cite { font-weight: 700;}blockquote cite a { font-weight: normal; }mark { background-color: #fdffb6;}code, tt { padding: 1px 3px; font-family: Inconsolata, monospace, sans-serif; font-size: 0.85em; white-space: pre-wrap; border: #E3EDF3 1px solid; background: #F7FAFB; border-radius: 2px; -webkit-font-feature-settings: "liga" 0; -moz-font-feature-settings: "liga" 0; font-feature-settings: "liga" 0;}pre { -moz-box-sizing: border-box; box-sizing: border-box; margin: 0 0 1.75em 0; border: #E3EDF3 1px solid; width: 100%; padding: 10px; font-family: Inconsolata, monospace, sans-serif; font-size: 0.9em; white-space: pre; overflow: auto; background: #F7FAFB; border-radius: 3px;}pre code, pre tt { font-size: inherit; white-space: pre-wrap; background: transparent; border: none; padding: 0;}kbd { display: inline-block; margin-bottom: 0.4em; padding: 1px 8px; border: #CCC 1px solid; color: #666; text-shadow: #FFF 0 1px 0; font-size: 0.9em; font-weight: 700; background: #F4F4F4; border-radius: 4px; box-shadow: 0 1px 0 rgba(0, 0, 0, 0.2), 0 1px 0 0 #fff inset;}table { -moz-box-sizing: border-box; box-sizing: border-box; margin: 1.75em 0; width: 100%; max-width: 100%; background-color: transparent;}table th,table td { padding: 8px; line-height: 20px; text-align: left; vertical-align: top; border-top: #EFEFEF 1px solid;}table th { color: #000; }table caption + thead tr:first-child th,table caption + thead tr:first-child td,table colgroup + thead tr:first-child th,table colgroup + thead tr:first-child td,table thead:first-child tr:first-child th,table thead:first-child tr:first-child td { border-top: 0;}table tbody + tbody { border-top: #EFEFEF 2px solid; }table table table { background-color: #FFF; }table tbody > tr:nth-child(odd) > td,table tbody > tr:nth-child(odd) > th { background-color: #F6F6F6;}table.plain tbody > tr:nth-child(odd) > td,table.plain tbody > tr:nth-child(odd) > th { background: transparent;}iframe, .fluid-width-video-wrapper { display: block; margin: 1.75em 0;}/* When a video is inside the fitvids wrapper, drop themargin on the iframe, cause it breaks stuff. */.fluid-width-video-wrapper iframe { margin: 0;}textarea, select, input { width: 260px; padding: 6px 9px; margin: 0 0 5px 0; outline: 0; font-family: 'Open Sans', sans-serif; font-size: 1.6rem; font-weight: 100; line-height: 1.4em; background: #fff; border: #e7eef2 1px solid; border-radius: 4px; box-shadow: none; -webkit-appearance: none;}textarea { width: 100%; max-width: 340px; min-width: 250px; height: auto; min-height: 80px;}input[type="text"]:focus,input[type="email"]:focus,input[type="search"]:focus,input[type="tel"]:focus,input[type="url"]:focus,input[type="password"]:focus,input[type="number"]:focus,input[type="date"]:focus,input[type="month"]:focus,input[type="week"]:focus,input[type="time"]:focus,input[type="datetime"]:focus,input[type="datetime-local"]:focus,textarea:focus { border: #bbc7cc 1px solid; background: #fff; outline: none; outline-width: 0;}select { width: 270px; height: 30px; line-height: 30px;}button { min-height: 35px; width: auto; display: inline-block; padding: 0.1rem 1.5rem; cursor: pointer; outline: none; text-decoration: none; color: #fff; font-family: 'Open Sans', sans-serif; font-size: 11px; /* Hacks targeting Firefox. */ line-height: 13px; /* Hacks targeting Firefox. */ font-weight: 300; text-align: center; letter-spacing: 1px; text-transform: uppercase; text-shadow: none; border-radius: 0.3rem; border: rgba(0,0,0,0.05) 0.1em solid; background: #5ba4e5;}/* ========================================================================== 3. Utilities - These things get used a lot ========================================================================== *//* Clears shit */.clearfix:before,.clearfix:after { content: " "; display: table;}.clearfix:after { clear: both; }.clearfix { zoom: 1; }/* Hides shit */.hidden { text-indent: -9999px; visibility: hidden; display: none;}/* Creates a responsive wrapper that makes our content scale nicely */.inner { position: relative; width: 80%; max-width: 710px; margin: 0 auto;}/* Centres vertically yo. (IE8+) */.vertical { display: table-cell; vertical-align: middle;}/* Wraps the main content & footer */.site-wrapper { position: relative; z-index: 10; min-height: 100%; background: #fff; -webkit-transition: -webkit-transform 0.5s ease; transition: transform 0.5s ease;}body.nav-opened .site-wrapper { overflow-x: hidden; -webkit-transform: translate3D(-240px, 0, 0); -ms-transform: translate3D(-240px, 0, 0); transform: translate3D(-240px, 0, 0); -webkit-transition: -webkit-transform 0.3s ease; transition: transform 0.3s ease;}/* ========================================================================== 4. General - The main styles for the the theme ========================================================================== *//* Big cover image on the home page */.main-header { position: relative; display: table; width: 100%; height: 40vh; margin-bottom: 5rem; text-align: center; background: #222 no-repeat center center; background-size: cover; overflow: hidden;}.main-header .inner { width: 80%;}.main-nav { position: relative; padding: 35px 40px; margin: 0 0 30px 0;}.main-nav a { text-decoration: none; font-family: 'Open Sans', sans-serif;}/* Navigation */body.nav-opened .nav-cover { position: fixed; top: 0; left: 0; right: 240px; bottom: 0; z-index: 200;}.nav { position: fixed; top: 0; right: 0; bottom: 0; z-index: 5; width: 240px; opacity: 0; background: #111; margin-bottom: 0; text-align: left; overflow-y: auto; -webkit-transition: -webkit-transform 0.5s ease, opacity 0.3s ease 0.7s; transition: transform 0.5s ease, opacity 0.3s ease 0.7s;}body.nav-closed .nav { -webkit-transform: translate3D(97px, 0, 0); -ms-transform: translate3D(97px, 0, 0); transform: translate3D(97px, 0, 0);}body.nav-opened .nav { opacity: 1; -webkit-transition: -webkit-transform 0.3s ease, opacity 0s ease 0s; transition: transform 0.3s ease, opacity 0s ease 0s; -webkit-transform: translate3D(0, 0, 0); -ms-transform: translate3D(0, 0, 0); transform: translate3D(0, 0, 0);}.nav-title { position: absolute; top: 45px; left: 30px; font-size: 16px; font-weight: 100; text-transform: uppercase; color: #fff;}.nav-close { position: absolute; top: 38px; right: 25px; width: 20px; height: 20px; padding: 0; font-size: 10px;}.nav-close:focus { outline: 0;}.nav-close:before,.nav-close:after { content: ''; position: absolute; top: 0; width: 20px; height: 1px; background: rgb(150,150,150); top: 15px; -webkit-transition: background 0.15s ease; transition: background 0.15s ease;}.nav-close:before { -webkit-transform: rotate(45deg); -ms-transform: rotate(45deg); transform: rotate(45deg);}.nav-close:after { -webkit-transform: rotate(-45deg); -ms-transform: rotate(-45deg); transform: rotate(-45deg);}.nav-close:hover:before,.nav-close:hover:after { background: rgb(255,255,255);}.nav ul { padding: 90px 9% 5%; list-style: none; counter-reset: item;}.nav li:before { display: block; float: right; padding-right: 4%; padding-left: 5px; text-align: right; font-size: 1.2rem; vertical-align: bottom; color: #B8B8B8; content: counter(item, lower-roman); counter-increment: item;}.nav li { margin: 0;}.nav li a { text-decoration: none; line-height: 1.4; font-size: 1.4rem; display: block; padding: 0.6rem 4%; overflow: hidden; white-space: nowrap; text-overflow: ellipsis;}.nav li a:after { display: inline-block; content: " ......................................................."; color: rgba(255,255,255,0.2); margin-left: 5px;}.nav .nav-current:before { color: #fff;}.nav .nav-current a:after { content: " "; border-bottom: rgba(255,255,255,0.5) 1px solid; width: 100%; height: 1px;}.nav a:link,.nav a:visited { color: #B8B8B8;}.nav li.nav-current a,.nav a:hover,.nav a:active,.nav a:focus { color: #fff;}.subscribe-button { -webkit-box-sizing: border-box; -moz-box-sizing: border-box; box-sizing: border-box; display: block; position: absolute; bottom: 30px; left: 30px; right: 30px; height: 38px; padding: 0 20px; color: #111 !important; /* Overides `.nav a:link, .nav a:visited` colour */ text-align: center; font-size: 12px; font-family: "Open Sans", sans-serif; text-transform: uppercase; text-decoration: none; line-height: 35px; border-radius: 3px; background: #fff; transition: all ease 0.3s;}.subscribe-button:before { font-size: 9px; margin-right: 6px;}/* Create a bouncing scroll-down arrow on homepage with cover image */.scroll-down { display: block; position: absolute; z-index: 100; bottom: 45px; left: 50%; margin-left: -16px; width: 34px; height: 34px; font-size: 34px; text-align: center; text-decoration: none; color: rgba(255,255,255,0.7); -webkit-transform: rotate(-90deg); -ms-transform: rotate(-90deg); transform: rotate(-90deg); -webkit-animation: bounce 4s 2s infinite; animation: bounce 4s 2s infinite;}/* Stop it bouncing and increase contrast when hovered */.scroll-down:hover { color: #fff; -webkit-animation: none; animation: none;}/* Put a semi-opaque radial gradient behind the icon to make it more visible on photos which happen to have a light background. */.home-template .main-header:after { display: block; content: " "; width: 150px; height: 130px; border-radius: 100%; position: absolute; bottom: 0; left: 50%; margin-left: -75px; background: radial-gradient(ellipse at center, rgba(0,0,0,0.15) 0%,rgba(0,0,0,0) 70%,rgba(0,0,0,0) 100%);}/* Hide when there's no cover image or on page2+ */.no-cover .scroll-down,.no-cover.main-header:after,.archive-template .scroll-down,.archive-template .main-header:after { display: none}/* Appears in the top left corner of your home page */.blog-logo { display: block; float: left; background: none !important; /* Makes sure there is never a background */ border: none !important; /* Makes sure there is never a border */}.blog-logo img { -webkit-box-sizing: border-box; -moz-box-sizing: border-box; box-sizing: border-box; display: block; height: 38px; padding: 1px 0 5px 0; width: auto;}.menu-button { -webkit-box-sizing: border-box; -moz-box-sizing: border-box; box-sizing: border-box; display: inline-block; float: right; height: 38px; padding: 0 15px; border-style: solid; border-width: 1px; opacity: 1; text-align: center; font-size: 12px; text-transform: uppercase; line-height: 35px; white-space: nowrap; border-radius: 3px; transition: all 0.5s ease;}.menu-button:before { font-size: 12px; font-weight: bold; margin-right: 6px; position: relative; top: 1px;}.menu-button:hover { background: #fff;}.menu-button:focus { outline: 0;}/* When the navigation is closed */.nav-closed .menu-button { color: #fff; border-color: rgba(255, 255, 255, 0.6);}.nav-closed .menu-button:hover { color: #222;}/* When the navigation is closed and there is no cover image */.nav-closed .no-cover .menu-button { border-color: #BFC8CD; color: #9EABB3;}.nav-closed .no-cover .menu-button:hover { border-color: #555; color: #555;}/* When the navigation is opened */.nav-opened .menu-button { padding: 0 12px; background: #111; border-color: #111; color: #fff; -webkit-transform: translate3D(94px, 0, 0); -ms-transform: translate3D(94px, 0, 0); transform: translate3D(94px, 0, 0); transition: all 0.3s ease;}.nav-opened .menu-button .word { opacity: 0; transition: all 0.3s ease;}/* Special styles when overlaid on an image*/.main-nav.overlay { position: absolute; top: 0; left: 0; right: 0; height: 70px; border: none; background: linear-gradient(to bottom, rgba(0,0,0,0.2) 0%,rgba(0,0,0,0) 100%);}.no-cover .main-nav.overlay { background: none;}/* The details of your blog. Defined in ghost/settings/ */.page-title { margin: 10px 0 10px 0; font-size: 5rem; letter-spacing: -1px; font-weight: 700; font-family: "Open Sans", sans-serif; color: #fff;}.page-description { margin: 0; font-size: 2rem; line-height: 1.5em; font-weight: 400; font-family: "Merriweather", serif; letter-spacing: 0.01rem; color: rgba(255,255,255,0.8);}.no-cover.main-header { min-height: 160px; max-height: 40vh; background: #f5f8fa;}.no-cover .page-title { color: rgba(0,0,0,0.8);}.no-cover .page-description { color: rgba(0,0,0,0.5);}/* Add subtle load-in animation for content on the home page */.home-template .page-title { -webkit-animation: fade-in-down 0.6s; animation: fade-in-down 0.6s; -webkit-animation-delay: 0.2s; animation-delay: 0.2s;}.home-template .page-description { -webkit-animation: fade-in-down 0.9s; animation: fade-in-down 0.9s; -webkit-animation-delay: 0.1s; animation-delay: 0.1s;}/* Every post, on every page, gets this style on its <article> tag */.post { position: relative; width: 80%; max-width: 710px; margin: 4rem auto; padding-bottom: 4rem; border-bottom: #EBF2F6 1px solid; word-wrap: break-word;}/* Add a little circle in the middle of the border-bottom on our .post just for the lolz and stylepoints. */.post:after { display: block; content: ""; width: 7px; height: 7px; border: #E7EEF2 1px solid; position: absolute; bottom: -5px; left: 50%; margin-left: -5px; background: #FFF; border-radius: 100%; box-shadow: #FFF 0 0 0 5px;}body:not(.post-template) .post-title { font-size: 3.6rem;}.post-title a { text-decoration: none;}.post-excerpt p { margin: 0; font-size: 0.9em; line-height: 1.7em;}.read-more { text-decoration: none;}.post-meta { display: block; margin: 1.75rem 0 0 0; font-family: "Open Sans", sans-serif; font-size: 1.5rem; line-height: 2.2rem; color: #9EABB3;}.author-thumb { width: 24px; height: 24px; float: left; margin-right: 9px; border-radius: 100%;}.post-meta a { color: #9EABB3; text-decoration: none;}.post-meta a:hover { text-decoration: underline;}.user-meta { position: relative; padding: 0.3rem 40px 0 100px; min-height: 77px;}.post-date { display: inline-block; margin-left: 8px; padding-left: 12px; border-left: #d5dbde 1px solid; text-transform: uppercase; font-size: 1.3rem; white-space: nowrap;}.user-image { position: absolute; top: 0; left: 0;}.user-name { display: block; font-weight: 700;}.user-bio { display: block; max-width: 440px; font-size: 1.4rem; line-height: 1.5em;}.publish-meta { position: absolute; top: 0; right: 0; padding: 4.3rem 0 4rem 0; text-align: right;}.publish-heading { display: block; font-weight: 700;}.publish-date { display: block; font-size: 1.4rem; line-height: 1.5em;}/* ========================================================================== 5. Single Post - When you click on an individual post ========================================================================== */.post-template .post-header { margin-bottom: 3.4rem;}.post-template .post-title { margin-bottom: 0;}.post-template .post-meta { margin: 0;}.post-template .post-date { padding: 0; margin: 0; border: none;}/* Stop elements, such as img wider than the post content, from creating horizontal scroll - slight hack due to imperfections with browser width % calculations and rounding */.post-template .content { overflow: hidden;}/* Tweak the .post wrapper style */.post-template .post { margin-top: 0; border-bottom: none; padding-bottom: 0;}/* Kill that stylish little circle that was on the border, too */.post-template .post:after { display: none;}/* Keep images centered, and allow images wider than the main text column to break out. */.post-content img { display: block; max-width: 126%; height: auto; padding: 0.6em 0; /* Centers an image by (1) pushing its left edge to the center of its container and (2) shifting the entire image in the opposite direction by half its own width. Works for images that are larger than their containers. */ position: relative; left: 50%; -webkit-transform: translateX(-50%); /* for Safari and iOS */ -ms-transform: translateX(-50%); /* for IE9 */ transform: translateX(-50%);}.footnotes { font-style: italic; font-size: 1.3rem; line-height: 1.6em;}.footnotes li { margin: 0.6rem 0;}.footnotes p { margin: 0;}.footnotes p a:last-child { text-decoration: none;}/* The author credit area after the post */.post-footer { position: relative; margin: 6rem 0 0 0; padding: 3rem 0 0 0; border-top: #EBF2F6 1px solid;}.post-footer h4 { font-size: 1.8rem; margin: 0;}.post-footer p { margin: 1rem 0; font-size: 1.4rem; line-height: 1.75em;}/* list of author links - location / url */.author-meta { padding: 0; margin: 0; list-style: none; font-size: 1.4rem; line-height: 1; font-style: italic; color: #9EABB3;}.author-meta a { color: #9EABB3;}.author-meta a:hover { color: #111;}/* Create some space to the right for the share links */.post-footer .author { margin-right: 180px;}.post-footer h4 a { color: #2e2e2e; text-decoration: none;}.post-footer h4 a:hover { text-decoration: underline;}/* Drop the share links in the space to the right. Doing it like this means it's easier for the author bio to be flexible at smaller screen sizes while the share links remain at a fixed width the whole time */.post-footer .share { position: absolute; top: 3rem; right: 0; width: 140px;}.post-footer .share a { font-size: 1.8rem; display: inline-block; margin: 1rem 1.6rem 1.6rem 0; color: #BBC7CC; text-decoration: none;}.post-footer .share .icon-twitter:hover { color: #55acee;}.post-footer .share .icon-facebook:hover { color: #3b5998;}.post-footer .share .icon-google-plus:hover { color: #dd4b39;}/* ========================================================================== 6. 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Footer - The bottom of every page ========================================================================== */.site-footer { position: relative; margin: 8rem 0 0 0; padding: 1rem 15px; font-family: "Open Sans", sans-serif; font-size: 1rem; line-height: 1.75em; color: #BBC7CC;}.site-footer a { color: #BBC7CC; text-decoration: none; font-weight: bold;}.site-footer a:hover { border-bottom: #bbc7cc 1px solid;}.poweredby { display: block; width: 45%; float: right; text-align: right;}.copyright { display: block; width: 45%; float: left;}/* ========================================================================== 12. 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<h1 class="post-title">The AnswerALS Galaxy</h1>
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<h6>The purpose of this Galaxy Instance is to help operate and document the computational experiments of <a target="_blank" href="http://answerals.org/">AnswerALS</a>.</h6>
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<h3 id="gettingstarted">For External Users: Accessing our pipelines</h3>
<p>In order to access the computational pipelines used by NeuroLINCS, visit our list of published workflows (Shared Data > Workflows). Clicking on any of these workflows will bring you to a page which describes the exact steps consituting our workflows.</p>
<p>If you'd like to run our galaxy workflows, you will need an instance of Galaxy to run our workflows on. The easiest way to set up a temporary Galaxy instance is with the <a target="_blank" href="https://github.com/bgruening/docker-galaxy-stable">Galaxy Docker Image</a>. In order to use that Docker Image, you will need access to a computer running a Docker Machine, which you can install on a laptop or heavier infrastructure using <a href="https://docs.docker.com/engine/installation/">these instructions</a>. Once you have a docker environment set up, you can follow the instructions on <a href="https://github.com/bgruening/docker-galaxy-stable">this page</a> to set up a docker Galaxy. Finally, once you have a galaxy running on your machine, you can upload our workflows from (Workflow > Upload or Import Workflow) by uploading the workflow file which you can download from this site, from the (Shared Data > Workflows) page, in the dropdown menu on any of our workflows. More information about our workflows is available [here](http://galaxy.neurolincs.org/u/terri/p/neurolincs-data-analysis-workflows). Please contact lenail at mit dot edu if you need any assistance!
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<h3 id="gettingstarted">For Collaborators: Getting Started with this Galaxy</h3>
<p>Galaxy, the website you're using, is a tool which visually wraps the command line, making it easier to run computational analyses. To the left, you'll find your tools, any of which you can click on to run. To the right, you'll find your history, which is the datasets that you've generated from each of the analyses. </p>
<p>In order to use this site to run computational pipelines, you'll need to register for an account which you can do under the 'user' dropdown at the top of the page. Once you do, you'll be able to upload datasets (Get Data > Upload File), run analyses, and download your results. The analyses will persist and Galaxy will maintain your histories, unless you delete them. </p>
<p>If you can't find the tool you're looking for, contact a site adminisrator (e.g. myself: lenail at mit dot edu) and we'll add it for you. Check below for a tutorial on how to use this Galaxy </p>
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