This section is auto-generated from the help text for the planemo command
shed_init. This help message can be generated with planemo shed_init
--help.
Usage:
planemo shed_init [OPTIONS] PROJECT
Help
Bootstrap new Tool Shed .shed.yml file.
This Tool Shed configuration file is used by other planemo commands
such as shed_lint, shed_create, shed_upload, and shed_diff
to manage repositories in a Galaxy Tool Shed.
Options:
--from_workflow PATH Attempt to generate repository dependencies
from specified workflow.
--description TEXT Specify repository description for .shed.yml.
--long_description TEXT Specify repository long_description for
.shed.yml.
--remote_repository_url TEXT Specify repository remote_repository_url for
.shed.yml.
--homepage_url TEXT Specify repository homepage_url for .shed.yml.
--category [Assembly|ChIP-seq|Combinatorial Selections|Computational chemistry|Constructive Solid Geometry|Convert Formats|Epigenetics|Data Export|Data Managers|Data Source|Fasta Manipulation|Fastq Manipulation|Flow Cytometry Analysis|Genome-Wide Association Study|Genomic Interval Operations|Graphics|Imaging|Metabolomics|Metagenomics|Micro-array Analysis|Next Gen Mappers|NLP|Ontology Manipulation|Phylogenetics|Proteomics|RNA|SAM|Sequence Analysis|Statistics|Systems Biology|Text Manipulation|Tool Dependency Packages|Tool Generators|Transcriptomics|Variant Analysis|Visualization|Web Services]
Specify repository category for .shed.yml (may
specify multiple).
--owner TEXT Tool Shed repository owner (username).
--name TEXT Tool Shed repository name (defaults to the
inferred tool directory name).
-f, --force Overwrite existing files if present.
--help Show this message and exit.