planemo.commands.cmd_bioc_conda_recipe_init module .. automodule:: planemo.commands.cmd_bioc_conda_recipe_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_bioc_tool_init module .. automodule:: planemo.commands.cmd_bioc_tool_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_brew module .. automodule:: planemo.commands.cmd_brew
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_brew_env module .. automodule:: planemo.commands.cmd_brew_env
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_brew_init module .. automodule:: planemo.commands.cmd_brew_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_ci_find_repos module .. automodule:: planemo.commands.cmd_ci_find_repos
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_ci_find_tools module .. automodule:: planemo.commands.cmd_ci_find_tools
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_clone module .. automodule:: planemo.commands.cmd_clone
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_build module .. automodule:: planemo.commands.cmd_conda_build
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_env module .. automodule:: planemo.commands.cmd_conda_env
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_init module .. automodule:: planemo.commands.cmd_conda_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_install module .. automodule:: planemo.commands.cmd_conda_install
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_lint module .. automodule:: planemo.commands.cmd_conda_lint
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_search module .. automodule:: planemo.commands.cmd_conda_search
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_config_init module .. automodule:: planemo.commands.cmd_config_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_container_register module .. automodule:: planemo.commands.cmd_container_register
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_create_gist module .. automodule:: planemo.commands.cmd_create_gist
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_cwl_script module .. automodule:: planemo.commands.cmd_cwl_script
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_database_create module .. automodule:: planemo.commands.cmd_database_create
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_database_delete module .. automodule:: planemo.commands.cmd_database_delete
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_database_list module .. automodule:: planemo.commands.cmd_database_list
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_dependency_script module .. automodule:: planemo.commands.cmd_dependency_script
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_docker_build module .. automodule:: planemo.commands.cmd_docker_build
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_docker_shell module .. automodule:: planemo.commands.cmd_docker_shell
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_docs module .. automodule:: planemo.commands.cmd_docs
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_lint module .. automodule:: planemo.commands.cmd_lint
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_mull module .. automodule:: planemo.commands.cmd_mull
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_mulled_init module .. automodule:: planemo.commands.cmd_mulled_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_normalize module .. automodule:: planemo.commands.cmd_normalize
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_open module .. automodule:: planemo.commands.cmd_open
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_profile_create module .. automodule:: planemo.commands.cmd_profile_create
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_profile_delete module .. automodule:: planemo.commands.cmd_profile_delete
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_profile_list module .. automodule:: planemo.commands.cmd_profile_list
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_project_init module .. automodule:: planemo.commands.cmd_project_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_pull_request module .. automodule:: planemo.commands.cmd_pull_request
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_run module .. automodule:: planemo.commands.cmd_run
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_serve module .. automodule:: planemo.commands.cmd_serve
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_share_test module .. automodule:: planemo.commands.cmd_share_test
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_build module .. automodule:: planemo.commands.cmd_shed_build
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_create module .. automodule:: planemo.commands.cmd_shed_create
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_diff module .. automodule:: planemo.commands.cmd_shed_diff
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_download module .. automodule:: planemo.commands.cmd_shed_download
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_init module .. automodule:: planemo.commands.cmd_shed_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_lint module .. automodule:: planemo.commands.cmd_shed_lint
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_serve module .. automodule:: planemo.commands.cmd_shed_serve
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_test module .. automodule:: planemo.commands.cmd_shed_test
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_update module .. automodule:: planemo.commands.cmd_shed_update
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_upload module .. automodule:: planemo.commands.cmd_shed_upload
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_syntax module .. automodule:: planemo.commands.cmd_syntax
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_test module .. automodule:: planemo.commands.cmd_test
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_test_reports module .. automodule:: planemo.commands.cmd_test_reports
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_tool_factory module .. automodule:: planemo.commands.cmd_tool_factory
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_tool_init module .. automodule:: planemo.commands.cmd_tool_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_travis_before_install module .. automodule:: planemo.commands.cmd_travis_before_install
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_travis_init module .. automodule:: planemo.commands.cmd_travis_init
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_virtualenv module .. automodule:: planemo.commands.cmd_virtualenv
:members:
:undoc-members:
:show-inheritance:
planemo.commands.cmd_workflow_convert module .. automodule:: planemo.commands.cmd_workflow_convert
:members:
:undoc-members:
:show-inheritance:
.. automodule:: planemo.commands
:members:
:undoc-members:
:show-inheritance: