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Install qiime tools at ORG: minimally qiime_alpha_diversity and qiime_beta_diversity #915

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jennaj opened this issue Jan 29, 2025 · 0 comments
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@jennaj
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jennaj commented Jan 29, 2025

These allow inputs that are not in a qva/qzv artifact. Very useful for microbiome workflows!
toolshed.g2.bx.psu.edu/repos/iuc/qiime_alpha_diversity/qiime_alpha_diversity/1.9.1.0
toolshed.g2.bx.psu.edu/repos/iuc/qiime_beta_diversity/qiime_beta_diversity/1.9.1.0

Notice that these are different than the Qiime2 tools already installed.
toolshed.g2.bx.psu.edu/repos/q2d2/qiime2__diversity__alpha/qiime2__diversity__alpha/2024.10.0+q2galaxy.2024.10.0
toolshed.g2.bx.psu.edu/repos/q2d2/qiime2__diversity__beta/qiime2__diversity__beta/2024.10.0+q2galaxy.2024.10.0

We could expand this to grab everything in the Qiime package. ORG only has Qimme2 (yes? or am I missing it?). EU has both.

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Requested at https://help.galaxyproject.org/t/metaphlan-diversity-tools/14608

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