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GermplasmAccession.xml
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GermplasmAccession.xml
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<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet type="text/xsl" href="/style/human.xsl"?>
<extension xmlns="http://rs.gbif.org/extension/"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:dc="http://purl.org/dc/terms/"
xsi:schemaLocation="http://rs.gbif.org/extension/ http://rs.gbif.org/schema/extension.xsd"
dc:title="Germplasm accession (v20140515)"
dc:description="The Germplasm Vocabulary provides a set of terms (supplementing the Darwin Core terms) for describing genebank accessions. These terms are maintained by the thematic community of plant genetic resources for food and agriculture (PGRFA). Most of these terms are imported from the Multi-Crop Passport Descriptor List (MCPD) maintained by Bioversity International and the Food and Agriculture Organization of the United Nations (FAO). Some terms were also developed by the European Cooperative Programme for Plant Genetic Resources (ECPGR)."
dc:relation="http://purl.org/germplasm/germplasmTerm"
name="GermplasmAccession"
namespace="http://purl.org/germplasm/germplasmTerm#"
rowType="http://purl.org/germplasm/germplasmTerm#GermplasmAccession"
dc:issued="2014-05-20">
<!--
Software application schema for the GBIF IPT data provider software, Darwin Core extension for genebanks (DwC-germplasm).
The Germplasm Vocabulary (Darwin Core extension for genebanks) was developed in 2009 for sharing genebank accession information using the GBIF Integrated Publishing Toolkit (IPT) from the Global Biodiversity Information Facility (GBIF).
Major update: New version based on PURL germplasm vocabulary, Dag Endresen (GBIF/NordGen), 2012-09-11.
Minor update: Minor cleanup of the text, update of the URL to the Term Wiki (terms.gbif.org to terms.tdwg.org), Dag Endresen, 2014-04-16.
Minor update 2014-05-15, 2014-05-20.
-->
<!-- GermplasmAccession -->
<property name="germplasmID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#germplasmID"
dc:description="A persistent identifier for a germplasm accession maintained as part of an ex situ genebank collection. Best practice is to use a globally unique and persistent identifier (PID)."
type="string"
examples="URI, DOI, LSID or similar; http://data.gbif.org/occurrences/215969415/"
dc:relation="http://terms.tdwg.org/wiki/germplasm:germplasmID"
group="GermplasmAccession"
required="false"/>
<property name="germplasmIdentifier"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#germplasmIdentifier"
dc:description="Accession name. Either a registered or other formal designation given to the accession."
examples="Rheinische Vorgebirgstrauben; Emma; Avlon"
type="string"
dc:relation="http://terms.tdwg.org/wiki/germplasm:germplasmIdentifier"
group="GermplasmAccession"
required="false"/>
<property name="biologicalStatus"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#biologicalStatus"
dc:description="The biological status for a germplasm accession describes the cultivation status and distinguish wild and primitive cultivars from modern cultivars and breeding lines (material under development)."
examples="Wild; Crop wild relative (CWR); Primitive; Traditional cultivar; Landrace; Breeding line; Genetic stock; Modern cultivar; 100; 110; 120; 200; 300; 400; 410; 411; 412; 413; 414; 415; 420; 500; 999"
type="string"
dc:relation="http://terms.tdwg.org/wiki/germplasm:biologicalStatus"
group="GermplasmAccession"
required="false"/>
<!--
thesaurus="http://rs.gbif.org/vocabulary/germplasm/BiologicalStatusType.xml"
-->
<property name="storageCondition"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmType#storageCondition"
dc:description="Type of germplasm storage conditions."
examples="10; 11; 12; 13; 20; 30; 40; 99, refer to FAO/IPGRI Genebank Standards 1994 for details on storage type."
type="string"
dc:relation="http://terms.tdwg.org/wiki/germplasm:storageCondition"
group="GermplasmAccession"
required="false"/>
<!--
thesaurus="http://rs.gbif.org/vocabulary/germplasm/StorageConditionType.xml"
-->
<!-- CollectingEvent -->
<!-- Most of the terms here are covered by the Darwin Core, dwc:Event and dwc(dcterms):Location -->
<property name="collectingInstituteID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#collectingInstituteID"
dc:description="Collecting institute ID."
type="string"
examples="SWE054; urn:lsid:biocol.org:col:35293, an established institute code for the collecting/gathering institute."
dc:relation="http://terms.tdwg.org/wiki/germplasm:collectingInstituteID"
group="CollectingEvent"
required="false"/>
<property name="latitude"
namespace="http://www.w3.org/2003/01/geo/wgs84_pos#"
qualName="http://www.w3.org/2003/01/geo/wgs84_pos#lat"
dc:description="Latitude of the collecting site for the source germplasm material."
type="decimal"
examples="-41.0983423"
dc:relation="http://terms.tdwg.org/wiki/geo:lat"
group="CollectingEvent"
required="false"/>
<property name="longitude"
namespace="http://www.w3.org/2003/01/geo/wgs84_pos#"
qualName="http://www.w3.org/2003/01/geo/wgs84_pos#lon"
dc:description="Longitude of the collecting site for the source germplasm material."
type="decimal"
examples="-121.1761111"
dc:relation="http://terms.tdwg.org/wiki/geo:lon"
group="CollectingEvent"
required="false"/>
<property name="altitude"
namespace="http://www.w3.org/2003/01/geo/wgs84_pos#"
qualName="http://www.w3.org/2003/01/geo/wgs84_pos#alt"
dc:description="Altitude of the collecting site for the source germplasm material."
type="integer"
examples="100"
dc:relation="http://terms.tdwg.org/wiki/geo:alt"
group="CollectingEvent"
required="false"/>
<property name="locationID"
namespace="http://rs.tdwg.org/dwc/terms/"
qualName="http://rs.tdwg.org/dwc/terms/locationID"
dc:description="An identifier for the set of location information (data associated with dcterms:Location). May be a globally unique identifier or an identifier specific to the data set."
type="string"
examples="http://sws.geonames.org/2726528/"
dc:relation="http://terms.tdwg.org/wiki/dwc:locationID"
group="CollectingEvent"
required="false"/>
<!-- BreedingEvent -->
<property name="breedingID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#breedingID"
dc:description="Persistent identifier for the source germplasm developed by a plant breeder."
type="string"
examples="Persistent identifier (PID) such as a URI, DOI, LSID or similar."
dc:relation="http://terms.tdwg.org/wiki/germplasm:breedingID"
group="BreedingEvent"
required="false"/>
<property name="breedingIdentifier"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#breedingIdentifier"
dc:description="The germplasm name or accession number used by the plant breeder."
type="string"
examples="Could be the breeders catalog number, or the name under which a cultivar was marketed."
dc:relation="http://terms.tdwg.org/wiki/germplasm:breedingIdentifier"
group="BreedingEvent"
required="false"/>
<property name="breedingYear"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#breedingYear"
dc:description="The year a germplasm accession was developed by a plant breeder. Could be the year the cultivar was released."
type="integer"
examples="2010"
dc:relation="http://terms.tdwg.org/wiki/germplasm:breedingYear"
group="BreedingEvent"
required="false"/>
<property name="breedingCountry"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#breedingCountry"
dc:description="Name of the country in which the breeding event took place."
type="string"
examples="Denmark; Finland; Iceland; Norway; Sweden"
dc:relation="http://terms.tdwg.org/wiki/germplasm:breedingCountry"
group="BreedingEvent"
required="false"/>
<property name="breedingCountryCode"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#breedingCountryCode"
dc:description="Code for the country in which the breeding event took place."
type="string"
examples="DNK; FIN; ISL; NOR; SWE"
dc:relation="http://terms.tdwg.org/wiki/germplasm:breedingCountryCode"
group="BreedingEvent"
required="false"/>
<property name="breedingInstituteID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#breedingInstituteID"
dc:description="Breeding institute code."
type="string"
examples="SWE006; urn:lsid:biocol.org:col:35293"
dc:relation="http://terms.tdwg.org/wiki/germplasm:breedingInstituteID"
group="BreedingEvent"
required="false"/>
<property name="breedingInstitute"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#breedingInstitute"
dc:description="Breeder institute name. If the FAO WIEWS institute code is available, this term is not to be reported."
type="string"
examples="Svalöf Weibull AB Cereal Breeding Department"
dc:relation="http://terms.tdwg.org/wiki/germplasm:breedingInstitute"
group="BreedingEvent"
required="false"/>
<property name="breedingPerson"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#breedingPerson"
dc:description="Name of the plant breeder."
type="string"
examples="Gregor Mendel; Luther Burbank; Nils Herman Nilsson-Ehle"
dc:relation="http://terms.tdwg.org/wiki/germplasm:breedingPerson"
group="BreedingEvent"
required="false"/>
<property name="ancestralData"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#ancestralData"
dc:description="Ancestral data, ANCEST. Information about either pedigree or other description of ancestral information."
examples="A pedigree, Hanna/7*Atlas//Turk/8*Atlas; or a description, mutation found in Hanna; selection from Irene."
type="string"
dc:relation="http://terms.tdwg.org/wiki/germplasm:ancestralData"
group="BreedingEvent"
required="false"/>
<property name="purdyPedigree"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#purdyPedigree"
dc:description="Ancestral information following the purdy pedigree format."
type="string"
examples="Hanna/7*Atlas//Turk/8*Atlas"
dc:relation="http://dx.doi.org/doi:10.2135/cropsci1968.0011183X000800040002x"
group="BreedingEvent"
required="false"/>
<property name="breedingRemarks"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#breedingRemarks"
dc:description="Remarks to the breeding event."
type="string"
examples="Supplementary comments and remarks related to the breeding event"
dc:relation="http://purl.org/germplasm/germplasmTerm#breedingRemarks"
group="BreedingEvent"
required="false"/>
<!-- AcquisitionEvent -->
<property name="acquisitionID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#acquisitionID"
dc:description="An identifier for the event when germplasm material was acquired and included in the genebank collection."
type="string"
examples="URI, DOI, LSID or similar"
dc:relation="http://terms.tdwg.org/wiki/germplasm:acquisitionID"
group="AcquisitionEvent"
required="false"/>
<property name="donorsID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#donorsID"
dc:description="An identifier for the source germplasm material that was included in your genebank collection."
type="string"
examples="http://data.gbif.org/occurrences/164390781/; URI, DOI, LSID or similar"
dc:relation="http://terms.tdwg.org/wiki/germplasm:donorsID"
group="AcquisitionEvent"
required="false"/>
<property name="donorsIdentifier"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#donorsIdentifier"
dc:description="An identifier for the source accession donated to your genebank collection. Could be an unique and stable local identifier specific to the dataset."
type="string"
examples="NGB1"
dc:relation="http://terms.tdwg.org/wiki/germplasm:donorsIdentifier"
group="AcquisitionEvent"
required="false"/>
<property name="donorInstituteID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#donorInstituteID"
dc:description="Donor institute code."
type="string"
examples="DEU146; NLD037; SWE054; urn:lsid:biocol.org:col:35293"
dc:relation="http://terms.tdwg.org/wiki/germplasm:donorInstituteID"
group="AcquisitionEvent"
required="false"/>
<property name="donorInstitute"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#donorInstitute"
dc:description="Donor institute name. If the FAO WIEWS institute code is available, this term is not to be reported."
type="string"
examples="Nordic Genetic Resources Center (NordGen)"
dc:relation="http://terms.tdwg.org/wiki/germplasm:donorInstitute"
group="AcquisitionEvent"
required="false"/>
<property name="acquisitionDate"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#acquisitionDate"
dc:description="Acquisition date, date when the germplasm material (accession) entered the genebank collection."
type="string"
examples="2010-05-10"
dc:relation="http://terms.tdwg.org/wiki/germplasm:acquisitionDate"
group="AcquisitionEvent"
required="false"/>
<property name="acquisitionSource"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#acquisitionSource"
dc:description="Collecting/acquisition source."
examples="10; 11; 12; 13; 14; 15; 20; 21; 22; 23; 24; 25; 26; 27; 28; 30; 40; 50; 60; 61; 62; 99"
type="integer"
dc:relation="http://terms.tdwg.org/wiki/germplasm:acquisitionSource"
group="AcquisitionEvent"
required="false"/>
<!--
thesaurus="http://rs.gbif.org/vocabulary/germplasm/AcquisitionSourceType.xml"
-->
<property name="acquisitionRemarks"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#acquisitionRemarks"
dc:description="Remarks to the acquisition event."
examples="General remarks related to the acquisition of the germplasm accession."
dc:relation="http://terms.tdwg.org/wiki/germplasm:acquisitionRemarks"
group="AcquisitionEvent"
required="false"/>
<!-- SafetyDuplication -->
<!-- NOTE may have multiple instances of this class. TODO: separate IPT extension? -->
<property name="safetyDuplicationID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#safetyDuplicationID"
dc:description="A persistent identifier for the genebank accession in the safe duplication storage."
type="string"
examples="URI, DOI, LSID or similar (for the accession in the safety duplication storage)"
dc:relation="http://terms.tdwg.org/wiki/germplasm:safetyDuplicationID"
group="SafetyDuplication"
required="false"/>
<property name="safetyDuplicationDate"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#safetyDuplicationDate"
dc:description="Date of safety duplication."
type="string"
examples="2008-02-26"
dc:relation="http://terms.tdwg.org/wiki/germplasm:safetyDuplicationDate"
group="SafetyDuplication"
required="false"/>
<property name="safetyDuplicationInstituteID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#safetyDuplicationInstituteID"
dc:description="Location of safety duplicates. Persistent identifier for the institute where a safety duplicate of the accession is maintained."
type="string"
examples="NOR051; urn:lsid:biocol.org:col:35294"
dc:relation="http://terms.tdwg.org/wiki/germplasm:safetyDuplicationInstituteID"
group="SafetyDuplication"
required="false"/>
<property name="safetyDuplicationInstitute"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#safetyDuplicationInstitute"
dc:description="Location or institute for storage of safety duplicates."
type="string"
examples="The name of the safety duplication institute"
dc:relation="http://terms.tdwg.org/wiki/germplasm:safetyDuplicationInstitute"
group="SafetyDuplication"
required="false"/>
<property name="safetyDuplicationRemarks"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#safetyDuplicationRemarks"
dc:description="Remarks to the safety duplication event."
examples="General remarks related to the safety duplication of the germplasm material."
dc:relation="http://terms.tdwg.org/wiki/germplasm:safetyDuplicationRemarks"
group="SafetyDuplication"
required="false"/>
<!-- TreatyOrRegulation -->
<!-- NOTE may have multiple instances of this class. TODO: separate IPT extension? -->
<property name="treatyOrRegulationID"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#treatyOrRegulationID"
dc:description="An identifier for the germplasm regulation or treaty."
type="string"
examples="URI, DOI, LSID or similar"
dc:relation="http://terms.tdwg.org/wiki/germplasm:treatyOrRegulationID"
group="TreatyOrRegulation"
required="false"/>
<property name="treatyOrRegulationName"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#treatyOrRegulationName"
dc:description="Regulation or treaty name."
type="string"
examples="The International Treaty for Plant Genetic Resources for Food and Agriculture (ITPGRFA)"
dc:relation="http://terms.tdwg.org/wiki/germplasm:treatyOrRegulationName"
group="TreatyOrRegulation"
required="false"/>
<property name="treatyOrRegulationGoverningBody"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#treatyOrRegulationGoverningBody"
dc:description="Governing body for the regulation or treaty."
type="string"
examples="Use the WIEWS institute code when possible"
dc:relation="http://terms.tdwg.org/wiki/germplasm:treatyOrRegulationGoverningBody"
group="TreatyOrRegulation"
required="false"/>
<property name="mlsStatus"
namespace="http://purl.org/germplasm/germplasmTerm#"
qualName="http://purl.org/germplasm/germplasmTerm#mlsStatus"
dc:description="The status of a germplasm accession with regards to the Multilateral System (MLS) of the International TReaty on Plant Genetic Resources for Food and Agriculture."
type="string"
examples="No; Yes; Other"
dc:relation="http://terms.tdwg.org/wiki/germplasm:mlsStatus"
group="TreatyOrRegulation"
required="false"/>
</extension>