setup.py

import codecs
import os
import re

import setuptools.dist


def read(*directories):
    pathname = os.path.abspath(os.path.dirname(__file__))

    return codecs.open(os.path.join(pathname, *directories), "r").read()


def find_version(*pathnames):
    data = read(*pathnames)

    matched = re.search(r"^__version__ = ['\"]([^'\"]*)['\"]", data, re.M)

    if matched:
        return matched.group(1)

    raise RuntimeError("Unable to find version string.")


__version__ = find_version("prokaryote", "__init__.py")

setuptools.setup(
    author="Allen Goodman",
    author_email="allen.goodman@icloud.com",
    classifiers=[
        "Development Status :: 5 - Production/Stable",
        "Intended Audience :: Science/Research",
        "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
        "Operating System :: OS Independent",
        "Programming Language :: Java",
        "Programming Language :: Python :: 2",
        "Programming Language :: Python :: 3",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
        "Topic :: Scientific/Engineering :: Image Recognition",
        "Topic :: Scientific/Engineering"
    ],
    license="BSD",
    name="prokaryote",
    package_data={
        "prokaryote": [
            "prokaryote-{}.jar".format(__version__)
        ]
    },
    packages=setuptools.find_packages(),
    python_requires=">=2.7, <4",
    url="https://github.com/CellProfiler/prokaryote",
    version=__version__,
    zip_safe=False
)