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Update to Goby 2.3.2 version.

Sep 8, 2013

8ed849a · Sep 8, 2013

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This branch is 3066 commits behind igvteam/igv:main.

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Folders and files

Name		Name	Last commit message	Last commit date
parent directory ..
AbsoluteLayout.jar		AbsoluteLayout.jar	Version 2.0 initial checkin	Nov 29, 2010
Jama-1.0.2.jar		Jama-1.0.2.jar	Version 2.0 initial checkin	Nov 29, 2010
StingUtils.jar		StingUtils.jar	Update na12878kb.jar and StingUtils.jar	Sep 4, 2013
apache_license.txt		apache_license.txt	Added commons-io jar	Mar 21, 2012
batik-awt-util.jar		batik-awt-util.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-bridge.jar		batik-bridge.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-codec.jar		batik-codec.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-css.jar		batik-css.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-dom.jar		batik-dom.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-ext.jar		batik-ext.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-gui-util.jar		batik-gui-util.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-gvt.jar		batik-gvt.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-parser.jar		batik-parser.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-svg-dom.jar		batik-svg-dom.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-svggen.jar		batik-svggen.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-transcoder.jar		batik-transcoder.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-util.jar		batik-util.jar	Version 2.0 initial checkin	Nov 29, 2010
batik-xml.jar		batik-xml.jar	Version 2.0 initial checkin	Nov 29, 2010
batik.LICENSE.txt		batik.LICENSE.txt	Version 2.0 initial checkin	Nov 29, 2010
batik.NOTICE.txt		batik.NOTICE.txt	Version 2.0 initial checkin	Nov 29, 2010
bcprov-debug-jdk15on-147.jar		bcprov-debug-jdk15on-147.jar	Add ability to parse ASN.1 files for amino acid translation tables, i…	Sep 17, 2012
cofoja-1.0-20110609.jar		cofoja-1.0-20110609.jar	Add google contracts library	Jun 21, 2012
commons-io-2.1.jar		commons-io-2.1.jar	Added commons-io jar	Mar 21, 2012
commons-jexl-2.1.1.jar		commons-jexl-2.1.1.jar	Add jexl library (necessary for new vcf codec, apparently) and fix ma…	Nov 9, 2012
commons-logging-1.1.1.jar		commons-logging-1.1.1.jar	restored commons-logging jar. Used by goby?	Oct 2, 2011
commons-math-2.2.jar		commons-math-2.2.jar	Update commons math jar	Dec 21, 2011
concurrent.jar		concurrent.jar	Version 2.0 initial checkin	Nov 29, 2010
goby-io-igv.jar		goby-io-igv.jar	Update to Goby 2.3.2 version.	Sep 8, 2013
gson-2.2.2.jar		gson-2.2.2.jar	Include na12878kb.jar (and update vcf.jar, StingUtils.jar) so we can …	Nov 29, 2012
guava-13.0.1.jar		guava-13.0.1.jar	Add google guava library, v13.0.1	Sep 18, 2012
jargs.jar		jargs.jar	Version 2.0 initial checkin	Nov 29, 2010
jcommon-1.0.16.jar		jcommon-1.0.16.jar	Kaplan-Meier updates	Dec 5, 2010
jfreechart-1.0.13.jar		jfreechart-1.0.13.jar	Kaplan-Meier updates	Dec 5, 2010
jgrapht-jdk1.6.jar		jgrapht-jdk1.6.jar	Add jgrapht library	Feb 2, 2012
jide-oss-3.5.5.jar		jide-oss-3.5.5.jar	Updates for Java 8. Update JIDE library, remove references to externa…	May 28, 2013
jlfgr-1_0.jar		jlfgr-1_0.jar	Version 2.0 initial checkin	Nov 29, 2010
junit-4.10.jar		junit-4.10.jar	Update junit to 4.10	May 24, 2012
log4j-1.2.15.jar		log4j-1.2.15.jar	Version 2.0 initial checkin	Nov 29, 2010
mongo-java-driver-2.7.3.jar		mongo-java-driver-2.7.3.jar	Include na12878kb.jar (and update vcf.jar, StingUtils.jar) so we can …	Nov 29, 2012
mysql-connector-java-3.1.14-bin.jar		mysql-connector-java-3.1.14-bin.jar	Added mySql jar	Oct 15, 2011
na12878kb.jar		na12878kb.jar	Update na1278kb.jar	Sep 4, 2013
picard-1.96.jar		picard-1.96.jar	User LineIterator.peek() when reading headers so we don't read beyond…	Aug 16, 2013
sam-1.96.jar		sam-1.96.jar	User LineIterator.peek() when reading headers so we don't read beyond…	Aug 16, 2013
sqlitejdbc-v056.jar		sqlitejdbc-v056.jar	Add sqlite jdbc driver	Jun 1, 2012
swing-layout-1.0.jar		swing-layout-1.0.jar	Version 2.0 initial checkin	Nov 29, 2010
tribble-1.96.jar		tribble-1.96.jar	User LineIterator.peek() when reading headers so we don't read beyond…	Aug 16, 2013
variant-1.96.jar		variant-1.96.jar	User LineIterator.peek() when reading headers so we don't read beyond…	Aug 16, 2013
xml-apis-1.3.04.jar		xml-apis-1.3.04.jar	Version 2.0 initial checkin	Nov 29, 2010
xml-apis-ext-1.3.04.jar		xml-apis-ext-1.3.04.jar	Version 2.0 initial checkin	Nov 29, 2010
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