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gahdritz

Add low-memory attention (still needs to be incorporated)

Dec 17, 2021

9670958 · Dec 17, 2021

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This branch is 1186 commits behind aqlaboratory/openfold:main.

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Name		Name	Last commit message	Last commit date
parent directory ..
test_data		test_data	Add sample features	Nov 14, 2021
__init__.py		__init__.py	Initial commit	Sep 17, 2021
compare_utils.py		compare_utils.py	Add low-memory attention (still needs to be incorporated)	Dec 17, 2021
config.py		config.py	Standardize code style	Oct 16, 2021
data_utils.py		data_utils.py	Bring tests up to speed	Oct 20, 2021
test_data_transforms.py		test_data_transforms.py	Added tests for the data_transforms	Dec 10, 2021
test_embedders.py		test_embedders.py	Standardize code style	Oct 16, 2021
test_evoformer.py		test_evoformer.py	Bring tests up to speed	Oct 20, 2021
test_feats.py		test_feats.py	Bring tests up to speed	Oct 20, 2021
test_import_weights.py		test_import_weights.py	Bring tests up to speed	Oct 20, 2021
test_loss.py		test_loss.py	Bring tests up to speed	Oct 20, 2021
test_model.py		test_model.py	Bring tests up to speed	Oct 20, 2021
test_msa.py		test_msa.py	Bring tests up to speed	Oct 20, 2021
test_outer_product_mean.py		test_outer_product_mean.py	Bring tests up to speed	Oct 20, 2021
test_pair_transition.py		test_pair_transition.py	Bring tests up to speed	Oct 20, 2021
test_primitives.py		test_primitives.py	Add low-memory attention (still needs to be incorporated)	Dec 17, 2021
test_structure_module.py		test_structure_module.py	Bring tests up to speed	Oct 20, 2021
test_template.py		test_template.py	Make template code use less memory during inference	Oct 28, 2021
test_triangular_attention.py		test_triangular_attention.py	Make triangular attention test even more sensitive	Dec 11, 2021
test_triangular_multiplicative_update.py		test_triangular_multiplicative_update.py	Fix bugs from previous commit	Nov 19, 2021
test_utils.py		test_utils.py	Add flat chunk slicing	Dec 3, 2021
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