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Commits on Mar 17, 2016

• Merge pull request lh3#55 from jdagilliland/master

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• Minor doc fix

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  jdagilliland

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Commits on Mar 16, 2016

• option to skip ALT

  lh3

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Commits on Feb 23, 2016

• Merge branch 'dev'

  lh3

  committed
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• Released bwa-0.7.13 (r1126)

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• Merge branch 'dev'

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• use /usr/env/perl

  lh3

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• added comment

  lh3

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• Port lh3#48 to the dev branch

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• Merge branch 'master' of github.com:lh3/bwa

  lh3

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• Merge pull request lh3#48 from srl147/master

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• Merge branch 'dev'

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Commits on Feb 13, 2016

• moved indexing to libbwa

  lh3

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Commits on Feb 11, 2016

• fix assertion failure report on bio-bwa-help mailing list

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  srl147

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Commits on Feb 1, 2016

• Merge branch 'dev'

  lh3

  committed
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• r1102: resumed versioning

  lh3

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• Merge branch 'dev'

  lh3

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• updated GRCh38 download link

  lh3

  committed
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• a typo in fastmap command-line prompt

  lh3

  committed
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• use /usr/bin/env perl

  lh3

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Commits on Jan 27, 2016

• integer overflow on indexing

  lh3

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• make kthread.c compiled with g++

  lh3

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• removed the pbread mode

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  lh3

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Commits on Jan 26, 2016

• Merge branch 'dev' of github.com:lh3/bwa into dev

  lh3

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• updated dependencies

  lh3

  committed
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• ropebwt2 for bwt construction

  lh3

  committed
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Commits on Jan 21, 2016

• Merge pull request lh3#51 from sethbrin/master

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Commits on Jan 20, 2016

• Merge pull request lh3#50 from mgymrek/patch-1

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• update the usage of main_fastmap

  

  zengping

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Commits on Jan 17, 2016

• Editing URL for b38 download

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  Melissa Gymrek

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Commits on Dec 11, 2015

• fix a bug where bwa_sa2pos could return without setting strand

  srl147

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Commits on Nov 15, 2015

• Merge pull request lh3#47 from mfcovington/feature/fix-maxk-error

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• Include 'unistd.h' to explicitly declare 'getopt'

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Commits on Aug 27, 2015

• Merge branch 'master' of github.com:lh3/bwa

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• Merge branch 'dev'

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