SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases

Notes and studies about single-cell RNA-Seq analysis

Gene expression meta-analysis visualization tool

Step-by-step analysis pipeline for RNA-seq data

Publication-ready volcano plots with enhanced colouring and labeling

Advanced Early Dengue Prediction and Exploration Service

Website for BIS 015L, Data Science for Biologists, UC Davis.

A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME, and promoter methylation. Methods for visualization were pr…

🎓 Sharing machine learning course / lecture notes.

Learn AI's role in addressing complex challenges. Build skills combining human and machine intelligence for positive real-world impact using AI

AI for Medicine Specialization - Coursera offered by deeplearning.ai

An R package for the analysis, meta-analysis and result reporting of RNA-Seq gene expression data - Next Generation!

PythonMaps Workshop for Scipy 2022

A series of templates for Quarto to convert a single Markdown input into beautiful and simple Powerpoint, HTML, and PDF presentations.

Install latest version of Aspera Connect and show example how to use it for downloading sequening data.

GEO RNA-seq Experiments Processing Pipeline

A Shiny web app for mapping datasets using Seurat v4

Brings bulk and pseudobulk transcriptomics to the tidyverse

This list of writing prompts covers a range of topics and tasks, including brainstorming research ideas, improving language and style, conducting literature reviews, and developing research plans.

Curated papers on Large Language Models in Healthcare and Medical domain

Materials for short, half-day workshops

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment

An awesome list of air quality resources.

Contains codes for project AEDES

Easy access to high-resolution daily climate data for Europe