DOSE 3.21.1.9001

update the default order of GSEA result (2021-12-09, Thu)
- if p.adjust is identical, sorted by abs(NES)

DOSE 3.21.1

upate DisGeNET and NCG data (2021-11-14, Sun)
- DisGeNET v7: 21671 genes, 30170 diseases and 1134942 gene-disease associations
  - 194515 variants, 14155 diseases and 369554 variant-disease associations
- NCG v7: 3177 cancer genes, 130 diseases and 6095 gene-disease associations

DOSE 3.20.0

Bioconductor 3.14 release

DOSE 3.19.4

update clusterProfiler citation (2021-09-30, Thu)
upate error message of enricher_internal (2021-9-3, Fri)

DOSE 3.19.3

upate DisGeNET and NCG data (2021-8-16, Mon)

DOSE 3.19.2

bug fixed, change 'is.na(path2name)' to 'all(is.na(path2name))' (2021-06-21, Mon)

DOSE 3.19.1

add dr slot to compareClusterResult, enrichRestul and gseaResult(2021-5-21, Fri)

DOSE 3.18

Bioconductor 3.13 release

DOSE 3.17

support setting seed for fgsea method if e.g. gseGO(seed = TRUE) (2020-10-28, Wed)
- YuLab-SMU#45

DOSE 3.16.0

Bioconductor 3.12 release (2020-10-28, Wed)

DOSE 3.15.4

update setReadable and geneInCategory methods for compareClusterResult object (2020-10-12, Mon)

DOSE 3.15.3

allow passing additional parameters to fgsea (2020-10-09, Fri)
- YuLab-SMU#40
add termsim and method slots to compareClusterResult, enrichRestul and gseaResult
- YuLab-SMU#39

DOSE 3.15.2

update NCG and DGN data (2020-10-09, Thu)

DOSE 3.14.0

Bioconductor 3.11 release

DOSE 3.13.2

fixed issue caused by R v4.0.0 (2020-03-12, Thu)
- length > 1 in coercion to logical
- YuLab-SMU#32

DOSE 3.13.1

remove S4Vectors dependencies (2019-12-19, Thu)
extend setReadable to support compareClusterResult (2019-12-02, Mon)
add gene2Symbol, keytype and readable slots for compareClusterResult
move compareClusterResult class definition from clusterProfiler (2019-11-01, Fri)

DOSE 3.12.0

Bioconductor 3.10 release

DOSE 3.11.2

ignore universe and print a message if users passing accidentally passing wrong input (2019-10-24, Thu)
- YuLab-SMU/clusterProfiler#217
gene with minimal ES value (NES < 0) will be reported in core_enrichment (2019-07-31, Wed)

DOSE 3.11.1

build_Anno now compatible with tibble (2019-05-28, Tue)

DOSE 3.10.0

Bioconductor 3.9 release

DOSE 3.9.4

export parse_ratio (2019-03-29, Tue)

DOSE 3.9.4

bug fixed of get_enriched (2019-01-14, Mon)
- YuLab-SMU/clusterProfiler#177

DOSE 3.9.2

mv enrichment vignettes to clusterProfiler-book (2019-01-10, Thu)

DOSE 3.9.1

asis parameter in [.enrichResult and [.gseaResult (2018-12-24, Mon)
- YuLab-SMU/enrichplot#17

DOSE 3.8

Bioconductor 3.8 release

DOSE 3.7.1

S3 accessor methods only return enriched terms. (2018-06-20, Wed)