- update
clusterProfiler
citation (2021-09-30, Thu) - upate error message of
enricher_internal
(2021-9-3, Fri)
- upate DisGeNET and NCG data (2021-8-16, Mon)
- bug fixed, change 'is.na(path2name)' to 'all(is.na(path2name))' (2021-06-21, Mon)
- add
dr
slot tocompareClusterResult
,enrichRestul
andgseaResult
(2021-5-21, Fri)
- Bioconductor 3.13 release
- support setting seed for fgsea method if e.g.
gseGO(seed = TRUE)
(2020-10-28, Wed)
- Bioconductor 3.12 release (2020-10-28, Wed)
- update
setReadable
andgeneInCategory
methods forcompareClusterResult
object (2020-10-12, Mon)
- allow passing additional parameters to fgsea (2020-10-09, Fri)
- add
termsim
andmethod
slots tocompareClusterResult
,enrichRestul
andgseaResult
- Bioconductor 3.11 release
- fixed issue caused by R v4.0.0 (2020-03-12, Thu)
- length > 1 in coercion to logical
- YuLab-SMU#32
- remove
S4Vectors
dependencies (2019-12-19, Thu) - extend
setReadable
to supportcompareClusterResult
(2019-12-02, Mon) - add
gene2Symbol
,keytype
andreadable
slots forcompareClusterResult
- move
compareClusterResult
class definition fromclusterProfiler
(2019-11-01, Fri)
- Bioconductor 3.10 release
- ignore
universe
and print a message if users passing accidentally passing wrong input (2019-10-24, Thu) - gene with minimal ES value (NES < 0) will be reported in
core_enrichment
(2019-07-31, Wed)
build_Anno
now compatible withtibble
(2019-05-28, Tue)
- Bioconductor 3.9 release
- export
parse_ratio
(2019-03-29, Tue)
- bug fixed of
get_enriched
(2019-01-14, Mon)
- mv enrichment vignettes to clusterProfiler-book (2019-01-10, Thu)
asis
parameter in[.enrichResult
and[.gseaResult
(2018-12-24, Mon)
- Bioconductor 3.8 release
- S3 accessor methods only return enriched terms. (2018-06-20, Wed)