tools.py

import datetime
import io
import pathlib
import pickle
import re
import uuid

import gym
import numpy as np
import tensorflow as tf
import tensorflow.compat.v1 as tf1
import tensorflow_probability as tfp
from tensorflow.keras.mixed_precision import experimental as prec
from tensorflow_probability import distributions as tfd


class AttrDict(dict):

  __setattr__ = dict.__setitem__
  __getattr__ = dict.__getitem__


class Module(tf.Module):

  def save(self, filename):
    values = tf.nest.map_structure(lambda x: x.numpy(), self.variables)
    with pathlib.Path(filename).open('wb') as f:
      pickle.dump(values, f)
    import mlflow
    mlflow.log_artifact(filename)

  def load(self, filename):
    with pathlib.Path(filename).open('rb') as f:
      values = pickle.load(f)
    tf.nest.map_structure(lambda x, y: x.assign(y), self.variables, values)

  def get(self, name, ctor, *args, **kwargs):
    # Create or get layer by name to avoid mentioning it in the constructor.
    if not hasattr(self, '_modules'):
      self._modules = {}
    if name not in self._modules:
      self._modules[name] = ctor(*args, **kwargs)
    return self._modules[name]


def nest_summary(structure):
  if isinstance(structure, dict):
    return {k: nest_summary(v) for k, v in structure.items()}
  if isinstance(structure, list):
    return [nest_summary(v) for v in structure]
  if hasattr(structure, 'shape'):
    return str(structure.shape).replace(', ', 'x').strip('(), ')
  return '?'


def graph_summary(writer, fn, *args):
  #step = tf.summary.experimental.get_step()
  def inner(*args):
    #tf.summary.experimental.set_step(step)
    with writer.as_default():
      fn(*args)
  
  return tf.numpy_function(inner, args, [])


def video_summary(name, video, logpath, step, fps=20):
  import os
  import shutil
  import imageio
  import mlflow
  
  if step is None:
    step = 0
  video = np.clip(255 * video, 0, 255).astype(np.uint8)
  
  if isinstance(logpath, str):
    gifdir = pathlib.Path(logpath) / 'gifs' / 'simulation'
  else:
    gifdir = pathlib.Path(str(logpath, 'utf-8')) / 'gifs' / 'comparison'
  
  if gifdir.is_dir():
    shutil.rmtree(gifdir)
  gifdir.mkdir(parents=True, exist_ok=True)

  counter = 1
  for seq in video:
    curdir = gifdir / (str(step) + '-' + str(counter) + '.gif')
    imageio.mimwrite(curdir, seq, fps = fps)
    counter += 1
  mlflow.log_artifact(gifdir)

  #writer = imageio.get_writer(str(gifdir) + '/' + str(step) + '.gif', mode = 'I', fps = fps)
  #print(tf.shape(video))
  #for im in video:
  #    writer.append_data(im)
  #writer.close()

  #name = name if isinstance(name, str) else name.decode('utf-8')
  #if np.issubdtype(video.dtype, np.floating):
  #  video = np.clip(255 * video, 0, 255).astype(np.uint8)
  #B, T, H, W, C = video.shape
  #try:
  #  frames = video.transpose((1, 2, 0, 3, 4)).reshape((T, H, B * W, C))
  #  summary = tf1.Summary()
  #  image = tf1.Summary.Image(height=B * H, width=T * W, colorspace=C)
  #  image.encoded_image_string = encode_gif(frames, fps)
  #  summary.value.add(tag=name + '/gif', image=image)
  #  tf.summary.experimental.write_raw_pb(summary.SerializeToString(), step)
  #except (IOError, OSError) as e:
  #  print('GIF summaries require ffmpeg in $PATH.', e)
  #  frames = video.transpose((0, 2, 1, 3, 4)).reshape((1, B * H, T * W, C))
  #  tf.summary.image(name + '/grid', frames, step)


def encode_gif(frames, fps):
  from subprocess import Popen, PIPE
  h, w, c = frames[0].shape
  pxfmt = {1: 'gray', 3: 'rgb24'}[c]
  cmd = ' '.join([
      f'ffmpeg -y -f rawvideo -vcodec rawvideo',
      f'-r {fps:.02f} -s {w}x{h} -pix_fmt {pxfmt} -i - -filter_complex',
      f'[0:v]split[x][z];[z]palettegen[y];[x]fifo[x];[x][y]paletteuse',
      f'-r {fps:.02f} -f gif -'])
  proc = Popen(cmd.split(' '), stdin=PIPE, stdout=PIPE, stderr=PIPE)
  for image in frames:
    proc.stdin.write(image.tostring())
  out, err = proc.communicate()
  if proc.returncode:
    raise IOError('\n'.join([' '.join(cmd), err.decode('utf8')]))
  del proc
  return out


def simulate(agent, envs, steps=0, episodes=0, state=None):
  # Initialize or unpack simulation state.
  if state is None:
    step, episode = 0, 0
    done = np.ones(len(envs), np.bool)
    length = np.zeros(len(envs), np.int32)
    obs = [None] * len(envs)
    agent_state = None
  else:
    step, episode, done, length, obs, agent_state = state
  while (steps and step < steps) or (episodes and episode < episodes):
    # Reset envs if necessary.
    if done.any():
      indices = [index for index, d in enumerate(done) if d]
      promises = [envs[i].reset(blocking=False) for i in indices]
      for index, promise in zip(indices, promises):
        obs[index] = promise()
    # Step agents.
    obs = {k: np.stack([o[k] for o in obs]) for k in obs[0]}
    action, agent_state = agent(obs, done, agent_state)
    action = np.array(action)
    assert len(action) == len(envs)
    # Step envs.
    promises = [e.step(a, blocking=False) for e, a in zip(envs, action)]
    obs, _, done = zip(*[p()[:3] for p in promises])
    obs = list(obs)
    done = np.stack(done)
    episode += int(done.sum())
    length += 1
    step += (done * length).sum()
    length *= (1 - done)
  # Return new state to allow resuming the simulation.
  return (step - steps, episode - episodes, done, length, obs, agent_state)


def count_episodes(directory):
  filenames = directory.glob('*.npz')
  lengths = [int(n.stem.rsplit('-', 1)[-1]) - 1 for n in filenames]
  episodes, steps = len(lengths), sum(lengths)
  return episodes, steps


def save_episodes(directory, episodes, batch_length):
  directory = pathlib.Path(directory).expanduser()
  directory.mkdir(parents=True, exist_ok=True)
  timestamp = datetime.datetime.now().strftime('%Y%m%dT%H%M%S')
  for episode in episodes:
    identifier = str(uuid.uuid4().hex)
    length = len(episode['reward'])
    if length < batch_length:
      continue
    filename = directory / f'{timestamp}-{identifier}-{length}.npz'
    with io.BytesIO() as f1:
      np.savez_compressed(f1, **episode)
      f1.seek(0)
      with filename.open('wb') as f2:
        f2.write(f1.read())


def load_episodes(directory, rescan, length=None, balance=False, seed=0):
  directory = pathlib.Path(directory).expanduser()
  random = np.random.RandomState(seed)
  cache = {}
  totals = {}
  while True:
    for filename in directory.glob('*.npz'):
      if filename not in cache:
        try:
          with filename.open('rb') as f:
            episode = np.load(f)
            episode = {k: episode[k] for k in episode.keys()}
        except Exception as e:
          print(f'Could not load episode: {e}')
          continue
        cache[filename] = episode
        if length:
          totals[filename] = len(episode['reward'])
    
    keys = list(cache.keys())
    if length:
      totals_vals = np.array(list(totals.values()))
      probs = totals_vals / totals_vals.sum()
      del totals_vals
    else:
      probs = None
    for index in random.choice(len(keys), rescan, p = probs):
      episode = cache[keys[index]]
      if length:
        total = totals[keys[index]]
        available = total - length + 1
        if available < 1:
          print(f'Skipped short episode of length {available}.')
          continue
        if balance:
          index = min(random.randint(0, total), available - 1)
        else:
          index = int(random.randint(0, available))
        episode = {k: v[index: index + length] for k, v in episode.items()}
      yield episode


class DummyEnv:

  def __init__(self):
    self._random = np.random.RandomState(seed=0)
    self._step = None

  @property
  def observation_space(self):
    low = np.zeros([64, 64, 3], dtype=np.uint8)
    high = 255 * np.ones([64, 64, 3], dtype=np.uint8)
    spaces = {'image': gym.spaces.Box(low, high)}
    return gym.spaces.Dict(spaces)

  @property
  def action_space(self):
    low = -np.ones([5], dtype=np.float32)
    high = np.ones([5], dtype=np.float32)
    return gym.spaces.Box(low, high)

  def reset(self):
    self._step = 0
    obs = self.observation_space.sample()
    return obs

  def step(self, action):
    obs = self.observation_space.sample()
    reward = self._random.uniform(0, 1)
    self._step += 1
    done = self._step >= 1000
    info = {}
    return obs, reward, done, info


class SampleDist:

  def __init__(self, dist, samples=100):
    self._dist = dist
    self._samples = samples

  @property
  def name(self):
    return 'SampleDist'

  def __getattr__(self, name):
    return getattr(self._dist, name)

  def mean(self):
    samples = self._dist.sample(self._samples)
    return tf.reduce_mean(samples, 0)

  def mode(self):
    sample = self._dist.sample(self._samples)
    logprob = self._dist.log_prob(sample)
    return tf.gather(sample, tf.argmax(logprob))[0]

  def entropy(self):
    sample = self._dist.sample(self._samples)
    logprob = self.log_prob(sample)
    return -tf.reduce_mean(logprob, 0)


class OneHotDist:

  def __init__(self, logits=None, probs=None):
    self._dist = tfd.Categorical(logits=logits, probs=probs)
    self._num_classes = self.mean().shape[-1]
    self._dtype = prec.global_policy().compute_dtype

  @property
  def name(self):
    return 'OneHotDist'

  def __getattr__(self, name):
    return getattr(self._dist, name)

  def prob(self, events):
    indices = tf.argmax(events, axis=-1)
    return self._dist.prob(indices)

  def log_prob(self, events):
    indices = tf.argmax(events, axis=-1)
    return self._dist.log_prob(indices)

  def mean(self):
    return self._dist.probs_parameter()

  def mode(self):
    return self._one_hot(self._dist.mode())

  def sample(self, amount=None):
    amount = [amount] if amount else []
    indices = self._dist.sample(*amount)
    sample = self._one_hot(indices)
    probs = self._dist.probs_parameter()
    sample += tf.cast(probs - tf.stop_gradient(probs), self._dtype)
    return sample

  def _one_hot(self, indices):
    return tf.one_hot(indices, self._num_classes, dtype=self._dtype)


class TanhBijector(tfp.bijectors.Bijector):

  def __init__(self, validate_args=False, name='tanh'):
    super().__init__(
        forward_min_event_ndims=0,
        validate_args=validate_args,
        name=name)

  def _forward(self, x):
    return tf.nn.tanh(x)

  def _inverse(self, y):
    dtype = y.dtype
    y = tf.cast(y, tf.float32)
    y = tf.where(
        tf.less_equal(tf.abs(y), 1.),
        tf.clip_by_value(y, -0.99999997, 0.99999997), y)
    y = tf.atanh(y)
    y = tf.cast(y, dtype)
    return y

  def _forward_log_det_jacobian(self, x):
    log2 = tf.math.log(tf.constant(2.0, dtype=x.dtype))
    return 2.0 * (log2 - x - tf.nn.softplus(-2.0 * x))


def lambda_return(
    reward, value, pcont, bootstrap, lambda_, axis):
  # Setting lambda=1 gives a discounted Monte Carlo return.
  # Setting lambda=0 gives a fixed 1-step return.
  assert reward.shape.ndims == value.shape.ndims, (reward.shape, value.shape)
  if isinstance(pcont, (int, float)):
    pcont = pcont * tf.ones_like(reward)
  dims = list(range(reward.shape.ndims))
  dims = [axis] + dims[1:axis] + [0] + dims[axis + 1:]
  if axis != 0:
    reward = tf.transpose(reward, dims)
    value = tf.transpose(value, dims)
    pcont = tf.transpose(pcont, dims)
  if bootstrap is None:
    bootstrap = tf.zeros_like(value[-1])
  next_values = tf.concat([value[1:], bootstrap[None]], 0)
  inputs = reward + pcont * next_values * (1 - lambda_)
  returns = static_scan(
      lambda agg, cur: cur[0] + cur[1] * lambda_ * agg,
      (inputs, pcont), bootstrap, reverse=True)
  if axis != 0:
    returns = tf.transpose(returns, dims)
  return returns


class Adam(tf.Module):

  def __init__(self, name, modules, lr, clip=None, wd=None, wdpattern=r'.*'):
    self._name = name
    self._modules = modules
    self._clip = clip
    self._wd = wd
    self._wdpattern = wdpattern
    self._opt = tf.optimizers.Adam(lr)
    self._opt = prec.LossScaleOptimizer(self._opt, 'dynamic')
    self._variables = None

  @property
  def variables(self):
    return self._opt.variables()

  def __call__(self, tape, loss):
    if self._variables is None:
      variables = [module.variables for module in self._modules]
      self._variables = tf.nest.flatten(variables)
      count = sum(np.prod(x.shape) for x in self._variables)
      print(f'Found {count} {self._name} parameters.')
    assert len(loss.shape) == 0, loss.shape
    with tape:
      loss = self._opt.get_scaled_loss(loss)
    grads = tape.gradient(loss, self._variables)
    grads = self._opt.get_unscaled_gradients(grads)
    norm = tf.linalg.global_norm(grads)
    if self._clip:
      grads, _ = tf.clip_by_global_norm(grads, self._clip, norm)
    if self._wd:
      context = tf.distribute.get_replica_context()
      context.merge_call(self._apply_weight_decay)
    self._opt.apply_gradients(zip(grads, self._variables))
    return norm

  def _apply_weight_decay(self, strategy):
    print('Applied weight decay to variables:')
    for var in self._variables:
      if re.search(self._wdpattern, self._name + '/' + var.name):
        print('- ' + self._name + '/' + var.name)
        strategy.extended.update(var, lambda var: self._wd * var)


def args_type(default):
  if isinstance(default, bool):
    return lambda x: bool(['False', 'True'].index(x))
  if isinstance(default, int):
    return lambda x: float(x) if ('e' in x or '.' in x) else int(x)
  if isinstance(default, pathlib.Path):
    return lambda x: pathlib.Path(x).expanduser()
  return type(default)


def static_scan(fn, inputs, start, reverse=False):
  last = start
  outputs = [[] for _ in tf.nest.flatten(start)]
  indices = range(len(tf.nest.flatten(inputs)[0]))
  if reverse:
    indices = reversed(indices)
  for index in indices:
    inp = tf.nest.map_structure(lambda x: x[index], inputs)
    last = fn(last, inp)
    [o.append(l) for o, l in zip(outputs, tf.nest.flatten(last))]
  if reverse:
    outputs = [list(reversed(x)) for x in outputs]
  outputs = [tf.stack(x, 0) for x in outputs]
  return tf.nest.pack_sequence_as(start, outputs)


def _mnd_sample(self, sample_shape=(), seed=None, name='sample'):
  return tf.random.normal(
      tuple(sample_shape) + tuple(self.event_shape),
      self.mean(), self.stddev(), self.dtype, seed, name)


tfd.MultivariateNormalDiag.sample = _mnd_sample


def _cat_sample(self, sample_shape=(), seed=None, name='sample'):
  assert len(sample_shape) in (0, 1), sample_shape
  assert len(self.logits_parameter().shape) == 2
  indices = tf.random.categorical(
      self.logits_parameter(), sample_shape[0] if sample_shape else 1,
      self.dtype, seed, name)
  if not sample_shape:
    indices = indices[..., 0]
  return indices


tfd.Categorical.sample = _cat_sample


class Every:

  def __init__(self, every):
    self._every = every
    self._last = None

  def __call__(self, step):
    if self._last is None:
      self._last = step
      return True
    if step >= self._last + self._every:
      self._last += self._every
      return True
    return False


class Once:

  def __init__(self):
    self._once = True

  def __call__(self):
    if self._once:
      self._once = False
      return True
    return False