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3 stars written in C
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A versatile pairwise aligner for genomic and spliced nucleotide sequences

C 1,835 424 Updated Nov 18, 2024

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

C 1,555 555 Updated Jul 27, 2024

HMMER: biological sequence analysis using profile HMMs

C 327 70 Updated Dec 18, 2024