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Commits on Nov 24, 2024

• chore: bumping to v0.3.1 for zenodo release

  leoisl

  committed
  6498c34

Commits on Dec 8, 2023

• chore: bumping version

  leoisl

  committed
  12963e8

Commits on Dec 7, 2023

• Merge pull request #22 from leoisl/fix/non_acgt_bases_in_query

  Show description for 458b5b6
  leoisl

  authored
  458b5b6

• ci: CMake requires key=value even for flags

  leoisl

  committed
  099e459

• ci: skipping python bindings when building on Mac OS X with gcc

  leoisl

  committed
  13fad52

• tests: passing std::string instead of fs::path in cobs::ClassicSearch to make Mac OS builds work

  leoisl

  committed
  e630069

• fix: now not erroring out when a non-ACGT base is in the query file

  Show description for 4b582df
  leoisl

  committed
  4b582df

Commits on Aug 8, 2023

• Merge pull request #21 from iqbal-lab-org/fix/20

  Show description for edd5441
  leoisl

  authored
  edd5441

Commits on Aug 7, 2023

• Now enabling querying reads from fastq.gz files

  Show description for 8a08867
  leoisl

  committed
  8a08867

Commits on Nov 2, 2022

• Removing dustbin__01 from mof integration tests to adhere to github 25MB

  Show description for e7eb5c0
  leoisl

  committed
  e7eb5c0

• Updating COBS version

  leoisl

  committed
  f02944d

• Fixing clang compilation issue

  leoisl

  committed
  ecfcf51

• Merge pull request #18 from leoisl/load_complete_streaming

  Show description for 987ebfb
  leoisl

  authored
  987ebfb

Commits on Oct 14, 2022

• Adding --index-sizes parameter to allow to read indexes from streams

  leoisl

  committed
  51f21dd

• Adding header_size_ to class ClassicIndexHeader

  leoisl

  committed
  4575ff8

Commits on Jul 19, 2022

• Updating README

  leoisl

  committed
  9601c8e

• Merge pull request #17 from leoisl/boost_root

  Show description for 5154fef
  leoisl

  authored
  5154fef

• Refactoring boost in cmake

  leoisl

  committed
  24b6aac

• Using BOOST_ROOT instead

  leoisl

  committed
  3eb1833

Commits on Jul 18, 2022

• Enables clang compilation (#16)

  Show description for 7c9804b
  leoisl

  authored
  7c9804b

Commits on Jul 16, 2022

• Putting -DCMAKE_BUILD_TYPE=Release in the readme

  Show description for 537bb43
  leoisl

  committed
  537bb43

• Improving CMakeLists.txt

  leoisl

  committed
  9e8164a

Commits on Jul 15, 2022

• Now finding ZLIB correctly in conda envs

  leoisl

  committed
  e3743d6

Commits on Jul 14, 2022

• sys/sysctl.h just included if __APPLE__

  leoisl

  committed
  d788488

• Removing deprecated header

  leoisl

  committed
  8b57336

• Adding -fopenmp and -Wall to default flags as we always want them

  leoisl

  committed
  780ddec

• Updating .gitignore

  leoisl

  committed
  00b327f

• Updating .gitignore

  leoisl

  committed
  e910420

• Making binary cobs to go to installation dir

  leoisl

  committed
  b8cb229

• Fixing typo

  leoisl

  committed
  db3e911

• Adding git-archive-all.sh

  leoisl

  committed
  11862f5

• Update README.md

  leoisl

  committed
  1802fbd

• Remove .travis.yml

  leoisl

  committed
  366f168

• CI try gcc/g++ on OS X

  leoisl

  committed
  cd4bbdd

• CI try

  leoisl

  committed
  74973a5

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